G25325


Basic Information

Item Value
gene id G25325
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 2138918 ~ 2139139 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU28560
CTTCTATTCCATGTCAGTCTCCCATGCTGTTGAAGTAGTAAGCACAGTGCAGCACTTCCGTGTTTATGTACAAACGCCAGCTCAGTATTGGCTGACGCTGTACACATGAGCACCACGACGCATGCACGTGATGCTGACTTAGGAGTCGGCCAATAATTAGCTGGCCTTCTGACGTAGAACCCAGAAGCGCTGCACTGTGTTTACTATGTCAACAGCGTAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU28560 True 222 lncRNA 0.50 1 2138918 2139139

Neighbor

gene id symbol gene type direction distance location
CI01000004_02126757_02136937 KDSR coding upstream 1570 2126466 ~ 2137348 (+)
CI01000004_02116310_02120268 VPS4B coding upstream 18558 2115937 ~ 2120360 (+)
CI01000004_02068075_02072887 NA coding upstream 64857 2067958 ~ 2074081 (+)
CI01000004_02033826_02057420 TSC22D2 coding upstream 81265 2033003 ~ 2057653 (+)
CI01000004_02014703_02018248 NA coding upstream 120452 2014600 ~ 2018466 (+)
CI01000004_02143355_02186281 BCL2B coding downstream 3537 2142676 ~ 2186771 (+)
CI01000004_02528689_02568243 NA coding downstream 389550 2528689 ~ 2569227 (+)
CI01000004_02671199_02727898 GPR158B coding downstream 532060 2671199 ~ 2728328 (+)
CI01000004_02745885_02768971 NA coding downstream 606746 2745885 ~ 2769135 (+)
CI01000004_02865415_02867952 NA coding downstream 725714 2864853 ~ 2868369 (+)
G25358 NA non-coding upstream 16327 2085759 ~ 2122591 (+)
G25332 NA non-coding upstream 57476 2074919 ~ 2081442 (+)
G25297 NA non-coding upstream 111126 1978730 ~ 2027792 (+)
CI01000004_01961480_01979407 DVL3A non-coding upstream 177859 1960055 ~ 1979465 (+)
G25301 NA non-coding downstream 239 2139378 ~ 2140889 (+)
G25372 NA non-coding downstream 53050 2192189 ~ 2192405 (+)
G25308 NA non-coding downstream 55268 2194407 ~ 2195224 (+)
G25310 NA non-coding downstream 98887 2238026 ~ 2240157 (+)
G25314 NA non-coding downstream 122989 2262128 ~ 2265277 (+)
G25329 NA other upstream 53211 2083057 ~ 2085707 (+)
CI01000004_01867166_01868986 C7H1ORF21 other upstream 265560 1867166 ~ 1868986 (+)
G25187 NA other upstream 522448 1604542 ~ 1616470 (+)
CI01000004_01332533_01345585 SCP2 other upstream 790744 1331583 ~ 1346008 (+)
CI01000004_00467911_00469949 AGRP2 other upstream 1667072 467802 ~ 471846 (+)
G25882 NA other downstream 408936 2548075 ~ 2573049 (+)
G25992 NA other downstream 597397 2736536 ~ 2736768 (+)
G26245 NA other downstream 1369878 3509017 ~ 3522393 (+)
CI01000004_03550525_03552621 PTGER4C other downstream 1411909 3550329 ~ 3553423 (+)

Expression


Co-expression Network