p4hb (p4hb,LOC107553316,LOC107591928,LOC107701207)


Basic Information

Item Value
gene id p4hb
gene name p4hb,LOC107553316,LOC107591928,LOC107701207
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 9930770 ~ 9940743 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043241686.1
TAAATGCGCATGCGCAGCGGCGTTGTCCTCTCTGTTTCCTGCGCACATTGCCACGTTATTAGCGGCAGACACAAAATTCAAGCGACACTTCAGCCTGATAAAGGTGAAAGAAGACTCGCCGCGCTAACAATCTCCCCGGTTTCCATCGCGGTATTATTAATAATCGGCGCGTTTGGAGGTGATCCGAGATGCTGAAGTTGTTGATTGTGTGCGCACTGGCCGCTATGAGCGCGGCTGATATCGCCGAGGAGGAGGACGTGCTCGTATTGAAGAAAAGTAACTTCGAGGAGGCGCTCAAAACTTACCCAAATATCCTTGTTGAGTTTTATGCACCATGGTGTGGACACTGCAAGGCCTTGGCCCCCGAATATGCCAAAGCAGCTGGTATGCTGAAAGCTGAAGGATCAGACATCAGATTAGGAAAGGTGGATGCAACTGAGGAATCTGAGCTTGCTCAGGAGTTTGGTGTTCGTGGATATCCCACCATCAAGTTCTTCAAGGGGGGAGAGAAGGAGAACCCCAAGGAGTATTCTGCTGGGCGGCAGGCTGATGACATCGTCAACTGGCTGAAAAAGCGAACTGGTCCTGCAGCTACTACTTTAACTGATGTGACACAGGCAGAGTCTCTTATTGCTGATAATCAGGTTGCAGTTATTGGGTTCtttaagGATGTTGAATCAGAAGATGCTAAGGCCTTTGTTAAAACTGCAGAGGCTGTGGATGACATCCCCTTTGGCATGACCTCAGATGATGCAGTCTTTTCAAAGTTTGAAGTGGCCAAGGATGGTGttgttctttttaagaagTTTGATGAGGGTCGCAATGCATTTGAAGGAGAGATCAGCAAAGAAAAGCTTCTGACCTTTATCAAATCCAACCAACTTCCACTGGTCATTGAGTTTACAGAGCAGACTGCTCCCAAAATCTTTGGAGGTGAAATCAAGTCCCACATTCTAATGTTTGTTCCCAAAACGGCCAAAGACTTCCAGGATAAGATGGACCAATTCAAGAAGGCAGCTGAGGGCTTTAAAGGCAAAATTCTCTTCATCTTTATTGACAGTGATGTGGATGATAATCAGCGAATTCTGGAGTTCTTTGGTCTTAAGAAGGAAGAGTGCCCAGCAATCCGCCTCATTACCCTCGAGGAAGAGATGACCAAATACAAACCAGAAACCTCAGAAATCACAACAGAGAACATAATCTCCTTCTGCACAGCTTTCACAGAAGGAAAACTCAAGCCGCATTTGATGAGTCAAGACATTCCTGATGACTGGGATAAGAACCCCGTCAAGGTCCTGGTGGGCAAAAACTTTGAAGAGGTTGCTTTCAACCCCGCCAAGAACGTCTTTGTAGAgttttATGCCCCATGGTGTGGTCACTGTAAACAGCTGGCCCCCATCTGGGATCAGTTGGGTGAGAAATTCAAAGACAATGCAAATATTGTTGTGGCCAAGATGGACTCCACAGCCAATGAGATTGAAGCTGTCAAAGTGCATAGCTTCCCCACACTCAAGTTCTTCCCTTCTGGTGATGACCGAAAGGTAATTGACTACAATGGTGAGAGAACGCTAGATGGATTCACAAAGTTTTTGGAGAGTGGAGGAAAAGAAGGTGGAGCACCAGCAGATGAGGATGAAGATTCTGATGATCTGGATCTTGATGTTGAGGAGGATGATTCAGATGTGGAAGATGGACACGATGAGTTATAAGAGTCAGGAGGAAAAGGCGAGACAAACCCCttcaccaccaccacctccaaTTTAAACCTCTCTGTCTGTGAACACTAAAGCTTTTCCTAACTAATCTAACAGCCACCGGGTGTTTACAGGGTCTTTCAGCCAGTTGTCATTACCAGTCCAGCCCAACTATCTGCAGCCCAGAGAAGTGCCTCTCTGCCCACAACAACTTTATCTCTTTGAAGTTTTACTGTACAGTttactttttgcattaaaatgtgttaGGTTTTTAGGTTTAATTCTACTGGTAATCTGTTGAACTGCTCTTTATACCTGCCCACTATCTCCTTTTGTGATCCGGGGGCTCAGTGTTAAGATTTTGCAGTATAGTCCTGGGAAGTACTCTCCTGATGGAGGAGAAAAGCCAGTTATTCTGCCTTAATTCTGTGGTTTGAATAAGTGGAAGTTTCAGGGTCGGGGGGAGGCTGCATGTCTGTCAACTTTTGTGTGGGAATAAAACTATAATAGGCTGCTATTACAGTGTGAACAAAACTTGGCACAGACGAAACTGAGGTACCTTCCTTGTTCCAAACCACATTTTCATATTCCTTTTCCAAATTTACACCTGctactgaattatttttaaagatgtaaaagtggagaacttgttttatttaattttatatttcaattaatttttttttattattattatttttttatatataatcttcCATACTGAAGGGCCCAGAAACAAGCACTTTTGTTGAACCTGGGGCAGAGTTGGCCCTCTCAGCTTTCTGGTCATCTGGGAGGATGATTTGAAACCTTGTTTTGCACTTCATTCAGTGCCATCAGAGATTCCATATCAGTTACTGAAATGAAGATTTATCATCTTGTAAGGACAATAATTGTCCCATACCCTTCTTGCTGTCCATCACTTTAGTGGAATATTCCTTCCACCTGGAGGTGTAATGCCGGTTGACGACTTCTGAGTGGTCAGTGTGACAGGGAGGAGAAAGTATGCTTGTAACCATCTTAATCAGTCTTTTCCCCTTCTTATGCCAGGGTTTAGGGTTGTGCATGTGTGAGATTTGGTTAACCCTCATGttgtctgtctttatttttctaGGAGCGGTGAATTTCAGGGGTGATGTTTAAAGAAAGGGAGGGTTTAGGAATTCAATTGGGTGGGGTTTGGGTTTTGAAATTTGTTGACATGTCTGATACAAAGCATTCCATTGCATAAAAATTTGAAACTGGTggccaaataaaaaaacaaaatggtaa

Function

symbol description
p4hb Predicted to enable protein disulfide isomerase activity. Predicted to be involved in protein folding and response to endoplasmic reticulum stress. Predicted to be located in endoplasmic reticulum lumen. Predicted to be active in endoplasmic reticulum. Human ortholog(s) of this gene implicated in Cole-Carpenter syndrome. Orthologous to several human genes including P4HB (prolyl 4-hydroxylase subunit beta).

NR:

description
PREDICTED: protein disulfide-isomerase

GO: NA

KEGG:

id description
K09580 PDIA1, P4HB; protein disulfide-isomerase A1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043241686.1 True 2966 mRNA 0.43 11 9930770 9940743

Neighbor

gene id symbol gene type direction distance location
LOC122346991 cep95 coding upstream 862109 9035026 ~ 9068661 (+)
polg2 polg2 coding upstream 919861 9002581 ~ 9010909 (+)
ten1 ten1 coding upstream 975516 8951326 ~ 8955254 (+)
aanat1 aanat,aanat1,LOC107742556 coding upstream 1044389 8884440 ~ 8886381 (+)
cygb2 cygb,cygb2,LOC107698994 coding upstream 1326969 8564382 ~ 8603801 (+)
ppp1r27b ppp1r27,LOC107710012,LOC107591937,LOC107553297 coding downstream 163 9940906 ~ 9943224 (+)
ccdc40 ccdc40,LOC107710029,LOC107669524 coding downstream 9108 9949851 ~ 9958610 (+)
card14 card14,LOC107710011,LOC107669523,LOC107553296 coding downstream 19625 9960368 ~ 9973522 (+)
LOC122347046 cbx4,LOC107710010,LOC107669529,LOC107553295 coding downstream 73146 10013889 ~ 10018092 (+)
cbx8b cbx8,cbx8b,LOC107710282,LOC107710028,LOC107553294,LOC107591932,LOC107669528 coding downstream 81871 10022614 ~ 10024882 (+)
G43943 NA non-coding upstream 104401 9488057 ~ 9826369 (+)
G43963 NA non-coding upstream 139433 9790155 ~ 9791337 (+)
G43940 nptx1,LOC107750979,LOC107701212 non-coding upstream 148729 9775637 ~ 9782041 (+)
G43936 NA non-coding upstream 202860 9384610 ~ 9727910 (+)
G43947 NA non-coding upstream 308040 9622164 ~ 9622730 (+)
G43982 LOC107553309,LOC107669536,LOC107710025 non-coding downstream 107316 10048059 ~ 10054261 (+)
G44089 NA non-coding downstream 138259 10079002 ~ 10079437 (+)
LOC122346827 NA non-coding downstream 156187 10096930 ~ 10101815 (+)
G44120 NA non-coding downstream 229349 10170092 ~ 10175131 (+)
G44129 NA non-coding downstream 263889 10204632 ~ 10210377 (+)
pecam1b NA other upstream 4513 9916050 ~ 9926257 (+)
G43962 rptor,LOC107728013,LOC107700860,LOC107553319 other upstream 119195 9786840 ~ 9811575 (+)
LOC122346821 endov other upstream 500115 9362142 ~ 9430655 (+)
G43889 NA other upstream 668908 9260633 ~ 9261862 (+)
G43879 NA other upstream 677030 9253149 ~ 9253740 (+)
LOC122346828 mcrip1,LOC107710264,LOC107553315,LOC107710031,LOC107591941,LOC108424716 other downstream 3775 9944518 ~ 9947929 (+)
dgke dgke,LOC107669536,LOC107710025,LOC107710026,LOC107669537,LOC107553311,LOC107591925,LOC107701198 other downstream 39122 9979865 ~ 10040364 (+)
atad5b LOC107578257,LOC107710017,LOC107669538 other downstream 175874 10116617 ~ 10123525 (+)
LOC122347096 LOC107704003,LOC107733914,LOC107555377,LOC107569363,LOC107660471,LOC107757423 other downstream 929635 10870378 ~ 10882899 (+)
pik3r6a zgc:158654,LOC107733898,LOC107555378,LOC107704002,LOC107757422,LOC105903457 other downstream 942217 10882960 ~ 10892460 (+)

Expression


Co-expression Network