Gene
RNA
| Item | Value |
|---|---|
| gene id | G25308 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000004 |
| NCBI id | null |
| chromosome length | 17451736 |
| location | 2194407 ~ 2195224 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU28543 | True | 818 | lncRNA | 0.33 | 1 | 2194407 | 2195224 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000004_02143355_02186281 | BCL2B | coding | upstream | 7636 | 2142676 ~ 2186771 (+) |
| CI01000004_02126757_02136937 | KDSR | coding | upstream | 57059 | 2126466 ~ 2137348 (+) |
| CI01000004_02116310_02120268 | VPS4B | coding | upstream | 74047 | 2115937 ~ 2120360 (+) |
| CI01000004_02068075_02072887 | NA | coding | upstream | 120346 | 2067958 ~ 2074081 (+) |
| CI01000004_02033826_02057420 | TSC22D2 | coding | upstream | 136754 | 2033003 ~ 2057653 (+) |
| CI01000004_02528689_02568243 | NA | coding | downstream | 333465 | 2528689 ~ 2569227 (+) |
| CI01000004_02671199_02727898 | GPR158B | coding | downstream | 475975 | 2671199 ~ 2728328 (+) |
| CI01000004_02745885_02768971 | NA | coding | downstream | 550661 | 2745885 ~ 2769135 (+) |
| CI01000004_02865415_02867952 | NA | coding | downstream | 669629 | 2864853 ~ 2868369 (+) |
| CI01000004_02903759_02904287 | NA | coding | downstream | 708535 | 2903759 ~ 2904324 (+) |
| G25372 | NA | non-coding | upstream | 2002 | 2192189 ~ 2192405 (+) |
| G25301 | NA | non-coding | upstream | 53518 | 2139378 ~ 2140889 (+) |
| G25325 | NA | non-coding | upstream | 55268 | 2138918 ~ 2139139 (+) |
| G25358 | NA | non-coding | upstream | 71816 | 2085759 ~ 2122591 (+) |
| G25332 | NA | non-coding | upstream | 112965 | 2074919 ~ 2081442 (+) |
| G25310 | NA | non-coding | downstream | 42802 | 2238026 ~ 2240157 (+) |
| G25314 | NA | non-coding | downstream | 66904 | 2262128 ~ 2265277 (+) |
| G25391 | NA | non-coding | downstream | 77347 | 2272571 ~ 2283981 (+) |
| G25418 | NA | non-coding | downstream | 127769 | 2322993 ~ 2323368 (+) |
| G25831 | NA | non-coding | downstream | 171531 | 2366755 ~ 2366995 (+) |
| G25329 | NA | other | upstream | 108700 | 2083057 ~ 2085707 (+) |
| CI01000004_01867166_01868986 | C7H1ORF21 | other | upstream | 321049 | 1867166 ~ 1868986 (+) |
| G25187 | NA | other | upstream | 577937 | 1604542 ~ 1616470 (+) |
| CI01000004_01332533_01345585 | SCP2 | other | upstream | 846233 | 1331583 ~ 1346008 (+) |
| CI01000004_00467911_00469949 | AGRP2 | other | upstream | 1722561 | 467802 ~ 471846 (+) |
| G25882 | NA | other | downstream | 352851 | 2548075 ~ 2573049 (+) |
| G25992 | NA | other | downstream | 541312 | 2736536 ~ 2736768 (+) |
| G26245 | NA | other | downstream | 1313793 | 3509017 ~ 3522393 (+) |
| CI01000004_03550525_03552621 | PTGER4C | other | downstream | 1355824 | 3550329 ~ 3553423 (+) |
