G25391


Basic Information

Item Value
gene id G25391
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 2272571 ~ 2283981 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU28628
GGGTATTAAATTTCATACTGACGTTAAGGGAAATACATTTATAAATCAGACTGGGTATGAATGTCAAATGGAAAAAAATATGAAAACAGAAAGAGACAAAAAGGCTGCAACAGGCCCCATGTGTGTGTGTGTGTGTGTGTGATTGCACCAGTAACTATGAGAAACGTACGTGCTGCTACTGCTTTACTGGGCAGTGGTGCCGCCGACGCACTGAGTGATGCGTTTGACAATGGCTTCATCTGATTGGCCATGAGCTGTTTCCTGTCTCGGTCATCTTCTAGCAGCCGTGTTGTTTCCTGTCTGCTCTGTTTGCTCTTGTCCAGCAGGTCTTTCCCAAAAAAGGCCTCCTGTAGGTAAGTGGGAAAAGCCTCCTCCAGTTTGGTCTTCTTTTTCCTATAGCGTTTCCGTATTTTAACCTCAGGATTGTCAGGAAAATCAGACAAAGGGTGTTTTTCATCAATTGGAGTGTCAGGCGCTTGGTCACCCCAGCCCTCATCTTTGCCTTGCAGGGTCTCAGAACCAGTGGAGTCCTTCCTGACCAAGGCTGGTTTAGTTCTGCCTGGACCTGTCCGGTTCCTCTGTCTGACCATGAAACCACCAATACCTGGGCGGTAGGGCTTCCTCTTCCTCTTCTTGCAGGCATCTGTGTCTTTAGAGTCATCTTCTGCTGTGGCCTCTCTTTCAGGACTGGAGTCTGACTTCCCCTCACCGTCCACTATCTCCCCTTCTTTTGGTGTCGTCAATGTCTCCATCTCTGGAGAGTTCAGTCTGTGGGTCTGGAGGAGTCTGCAGCACGGCCACACTGTTCTGGTTTATGATCTTCAGTTTGAGTTTGGGTTTGGAGCGTCTCCGGCGAGAGGCTGCATTGGCGAGACTCTGTAGCTGGGACAGACCAGACTCCGTGAGACAAACACCGTCCTGGGTGTACGTCCTCGACAAGTCTGTGGAGCAGAAACATAGAGGAACCTCATTGGAAACACAAAGAACCAACTCAAAATAATTATTCACTCTCAACTTGTACATTATTATGGCCTGTGAGAAAGTTTTACTCTACAAAGAATAATATCTAGTTGATGAAATATTTCATAGCAAAGCATAACCAGAAACATTTATATTCAATATAGAAATTTTGGTAACACTAAATAATGATTTAACAAACATTAATGTAAATAAATGTTGAAATTAACATTACCTAAGATTAAGGCTAAGATTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU28628 True 1215 lncRNA 0.45 5 2272571 2283981

Neighbor

gene id symbol gene type direction distance location
CI01000004_02143355_02186281 BCL2B coding upstream 85800 2142676 ~ 2186771 (+)
CI01000004_02126757_02136937 KDSR coding upstream 135223 2126466 ~ 2137348 (+)
CI01000004_02116310_02120268 VPS4B coding upstream 152211 2115937 ~ 2120360 (+)
CI01000004_02068075_02072887 NA coding upstream 198510 2067958 ~ 2074081 (+)
CI01000004_02033826_02057420 TSC22D2 coding upstream 214918 2033003 ~ 2057653 (+)
CI01000004_02528689_02568243 NA coding downstream 244708 2528689 ~ 2569227 (+)
CI01000004_02671199_02727898 GPR158B coding downstream 387218 2671199 ~ 2728328 (+)
CI01000004_02745885_02768971 NA coding downstream 461904 2745885 ~ 2769135 (+)
CI01000004_02865415_02867952 NA coding downstream 580872 2864853 ~ 2868369 (+)
CI01000004_02903759_02904287 NA coding downstream 619778 2903759 ~ 2904324 (+)
G25314 NA non-coding upstream 7294 2262128 ~ 2265277 (+)
G25310 NA non-coding upstream 32414 2238026 ~ 2240157 (+)
G25308 NA non-coding upstream 77347 2194407 ~ 2195224 (+)
G25372 NA non-coding upstream 80166 2192189 ~ 2192405 (+)
G25301 NA non-coding upstream 131682 2139378 ~ 2140889 (+)
G25418 NA non-coding downstream 39012 2322993 ~ 2323368 (+)
G25831 NA non-coding downstream 82774 2366755 ~ 2366995 (+)
G25847 NA non-coding downstream 106308 2390289 ~ 2390489 (+)
G25858 NA non-coding downstream 121404 2405385 ~ 2405617 (+)
G25872 NA non-coding downstream 132191 2416172 ~ 2418592 (+)
G25329 NA other upstream 186864 2083057 ~ 2085707 (+)
CI01000004_01867166_01868986 C7H1ORF21 other upstream 399213 1867166 ~ 1868986 (+)
G25187 NA other upstream 656101 1604542 ~ 1616470 (+)
CI01000004_01332533_01345585 SCP2 other upstream 924397 1331583 ~ 1346008 (+)
CI01000004_00467911_00469949 AGRP2 other upstream 1800725 467802 ~ 471846 (+)
G25882 NA other downstream 264094 2548075 ~ 2573049 (+)
G25992 NA other downstream 452555 2736536 ~ 2736768 (+)
G26245 NA other downstream 1225036 3509017 ~ 3522393 (+)
CI01000004_03550525_03552621 PTGER4C other downstream 1267067 3550329 ~ 3553423 (+)

Expression


Co-expression Network