G25892


Basic Information

Item Value
gene id G25892
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 2456327 ~ 2456588 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU29224
CATTATTGTATTTCATTCTAATGAAATAGCCACAAGCGCTAAAATTCTATTCATTCAGGTCACTTTATTTGATAAATTAAAATTGTGGGGTAATGCAGCGCTGTTTTACTTGGTCAAAACAATCATACTAAAAATACATTTGAGTTTGTTGAAAGTTATGTTAATGTTACACTGTGCGTTCGCTCAGTGGCTGGTATGAGACACTTGTTGCACATTGCAGTAAGCTAGATCATTATTAGAATATCATATTAATAAACGCTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU29224 True 262 lncRNA 0.33 1 2456327 2456588

Neighbor

gene id symbol gene type direction distance location
CI01000004_02143355_02186281 BCL2B coding upstream 269556 2142676 ~ 2186771 (+)
CI01000004_02126757_02136937 KDSR coding upstream 318979 2126466 ~ 2137348 (+)
CI01000004_02116310_02120268 VPS4B coding upstream 335967 2115937 ~ 2120360 (+)
CI01000004_02068075_02072887 NA coding upstream 382266 2067958 ~ 2074081 (+)
CI01000004_02033826_02057420 TSC22D2 coding upstream 398674 2033003 ~ 2057653 (+)
CI01000004_02528689_02568243 NA coding downstream 72101 2528689 ~ 2569227 (+)
CI01000004_02671199_02727898 GPR158B coding downstream 214611 2671199 ~ 2728328 (+)
CI01000004_02745885_02768971 NA coding downstream 289297 2745885 ~ 2769135 (+)
CI01000004_02865415_02867952 NA coding downstream 408265 2864853 ~ 2868369 (+)
CI01000004_02903759_02904287 NA coding downstream 447171 2903759 ~ 2904324 (+)
G25891 NA non-coding upstream 172 2455824 ~ 2456155 (+)
G25872 NA non-coding upstream 37735 2416172 ~ 2418592 (+)
G25858 NA non-coding upstream 50710 2405385 ~ 2405617 (+)
G25847 NA non-coding upstream 65838 2390289 ~ 2390489 (+)
G25831 NA non-coding upstream 89332 2366755 ~ 2366995 (+)
G25873 NA non-coding downstream 3276 2459864 ~ 2474194 (+)
G25871 NA non-coding downstream 17783 2474371 ~ 2482357 (+)
G25885 NA non-coding downstream 25920 2482508 ~ 2526828 (+)
G25914 NA non-coding downstream 154625 2611213 ~ 2612468 (+)
G25884 NA non-coding downstream 187602 2644190 ~ 2645662 (+)
G25329 NA other upstream 370620 2083057 ~ 2085707 (+)
CI01000004_01867166_01868986 C7H1ORF21 other upstream 582969 1867166 ~ 1868986 (+)
G25187 NA other upstream 839857 1604542 ~ 1616470 (+)
CI01000004_01332533_01345585 SCP2 other upstream 1108153 1331583 ~ 1346008 (+)
CI01000004_00467911_00469949 AGRP2 other upstream 1984481 467802 ~ 471846 (+)
G25882 NA other downstream 91487 2548075 ~ 2573049 (+)
G25992 NA other downstream 279948 2736536 ~ 2736768 (+)
G26245 NA other downstream 1052429 3509017 ~ 3522393 (+)
CI01000004_03550525_03552621 PTGER4C other downstream 1094460 3550329 ~ 3553423 (+)

Expression


Co-expression Network