G26171


Basic Information

Item Value
gene id G26171
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 3217822 ~ 3218778 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU29539
TGAACTAACCCTTTAAATAATTATATCAATTAGTATAACGTGTATGATGTAGTATCTTAGCATCCCTTGTCAAAGCTTTGATTTCTGAGAGATGCACAACAGAAAAACAACTATTTGATTTGCGATGTGCTGTCCTTATTTCATTCATAAAGTGTTGCATGTCGTACAAGGTTTAAAACATTTAAATAGACATCAAATAGTAGAAAATGTGTATGATGTAGTATTTTATATTATATAGTATTTTGTATCTGTATTAGAGTTGCAATCGTGCCCTGCTTATTTCATTCATAAAGTTTACACACATTCCCTTCACACACTCATTATTGTGTAGTGTGTGATTTTAGAGGTTTATGTATAATACCATGCTATGCTATCCCCTAAATCACCTGTTATCCAGCAAACACAAGTGACCATGTCTGTAGAATGTTTTTCCTATTATTCAGTAGAATTTGTTATTCGTTTTGATGCCTTTCCGAATAAGGTATTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU29539 True 487 lncRNA 0.32 2 3217822 3218778

Neighbor

gene id symbol gene type direction distance location
CI01000004_03206527_03212826 CDC7 coding upstream 4868 3206527 ~ 3212954 (+)
CI01000004_03197795_03203130 CDCP2 coding upstream 14692 3197795 ~ 3203130 (+)
CI01000004_03177552_03184142 NA coding upstream 32765 3177552 ~ 3185057 (+)
CI01000004_03126603_03131458 FAM151A coding upstream 86261 3126494 ~ 3131561 (+)
CI01000004_03124603_03125975 NA coding upstream 91715 3124603 ~ 3126107 (+)
CI01000004_03223283_03238063 RPAP2 coding downstream 4135 3222913 ~ 3238081 (+)
CI01000004_03267663_03271388 NA coding downstream 47941 3266719 ~ 3271562 (+)
CI01000004_03275086_03275655 RPL5 coding downstream 56308 3275086 ~ 3275702 (+)
CI01000004_03311105_03322167 MTF2 coding downstream 92327 3311105 ~ 3322802 (+)
CI01000004_03324524_03348961 CCDC18 coding downstream 105746 3324524 ~ 3349113 (+)
G26147 NA non-coding upstream 120668 3096857 ~ 3097154 (+)
G26128 NA non-coding upstream 147584 3070002 ~ 3070238 (+)
G26063 NA non-coding upstream 148036 3069460 ~ 3069786 (+)
G26059 NA non-coding upstream 219848 2995491 ~ 2997974 (+)
G26099 NA non-coding upstream 265504 2951897 ~ 2952318 (+)
G26182 NA non-coding downstream 47699 3266477 ~ 3266688 (+)
G26184 NA non-coding downstream 61115 3279893 ~ 3280094 (+)
G26185 NA non-coding downstream 64126 3282904 ~ 3283164 (+)
G26186 NA non-coding downstream 67048 3285826 ~ 3286162 (+)
CI01000004_02745885_02768971 NA other upstream 458884 2745885 ~ 2769135 (+)
G25992 NA other upstream 481054 2736536 ~ 2736768 (+)
G25882 NA other upstream 644773 2548075 ~ 2573049 (+)
G25329 NA other upstream 1132115 2083057 ~ 2085707 (+)
CI01000004_01867166_01868986 C7H1ORF21 other upstream 1344464 1867166 ~ 1868986 (+)
G26245 NA other downstream 290239 3509017 ~ 3522393 (+)
CI01000004_03550525_03552621 PTGER4C other downstream 332270 3550329 ~ 3553423 (+)
G27805 NA other downstream 2154047 5372825 ~ 5373803 (+)
G28165 NA other downstream 2513811 5732589 ~ 5733001 (+)
G28302 NA other downstream 3251250 6470028 ~ 6502087 (+)

Expression


Co-expression Network