G33092


Basic Information

Item Value
gene id G33092
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 14023547 ~ 14031127 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU37520
AAGAGTTGCGAGCAGACAGAGGGCTCTTTCTTATAGCGTACGGCCTAGAAAGACTGAGAAACAGTGACTCAACTCCTCCTCTCACACGCAGGCTCCAGGTACAGAAGCGGATATGTGCTGTTCCTGCCTTCCAGTCAGAGCAGCAGATTGTGTTGCTGAAACCAGGGTTATGTGATGCCTTTAGAGACGTCTGGACTGACCCCTGATCACAGCCGAAATGCCCCCATTCCATCACATCTGTGAGAGTCAAGGCAGAAGAGACTAAAATAGAGTTGGAGTCTCCAGAGAGACTGATGCTGAGAGGAATCCACCCAGCATAAACACGACCCACGATCTCCGCAGCCAAAAGATATGAATCGTCAAAAGTCAAAGCGAAACATCTCATAAGCAATGCTTTGTTGTTAGATCCCAAAGGCAAGGCGTTTTATGAGATGAATGGTGAGGTTTGAGATTAAAGCAATAACTGTGAGCATTGAGGATTTTGAAATTGTCCATCCATCATTTATTACAACTGGCTTGTGAGATATTTCCTCAGGATGGGACTTGCTATGACATGAGCAGAACATTTACTGCGCTGAAGCAGTGTTAGAACTGGCTCAAATGGACAGTTTCTTGATCTCTTGATAGAAATCCCATGCTAATTACTGGTTTAATCGGATCTACAGTGGCTTTACATCTCAGATCGCATTGGATTTGATCTCTACAGGGATTTGAAGAACTCTTGCTGAACCATGAAGGAGGCAATCGTGCAGTTTTTCAATGATGTATGGACCCTTGCTTCATCCAAGCATGACCAGAGCATCTACAACACGGTTTGCCTGGTAGTGCTTCTGACTCTGCCGCTGGTTGTGCTCTTCACATCTGTGCTGGTCTGCTGTCATTGTTGCTGCTGTCGTCATGCCAATGGATGTCGGTGCTGTCGCCGCAAAAGCGAGACCTCAGTGACAAATGTGAAATCCGAAAAGAAGAAGAAAAAGAAAAACGGCAGCCAGAACAGTGAAGACTTGTGGATCTCTGTCAAAGCAGATCCCATGAGTAGTGACAGACTTGCACTCACTATGGTGTAAAAAGCCACATTGAACATGAGCAATTTTATATTTATTTATCTTTATGGTACATGTAAAGGTACAAAAGTGTTACAGCAGTGTTTACTTAAAATGTGCCTGAATGTAAAAAGAAAGAGAGAATTTCAAGAGACTTTTTGTATATAAATGAAATTTGGGAGTGAATGAATGTGCAAGAATATGTTATATGATGTGTGTGTGGTCCTGAAAAGCTTTCCCATAACCCACATTTTAGGTGAAAAGAAATGCAAATCTGTCATTATACAACAGTTAATCCGGGGCCTTGGATTTGATTTCCTGAGCTGTGTTTTTGCATTTGACTGCACTGATTTACTATTGATTTTTTGTGTAAACATGCTCTAGAGCATTATTGTGCTCACGCCTTTCTTGAGTCTTGCGCATGACATGGCTTTCTAAAAATGTGGTGGTTAATTAAAAATAGTTCAACTTTAAAAGAAAAAAAGCTCTAGACCTTACGTTTTTTCATTTCACTGCCATGAGTCTGCCACGCAAAAACGTGTTCTGTGTGAATGGCTCCTGATAAACAGTCCAAAAGCACCGGGACTTTTTACTGTTAGTATCACTCCGCTTATCTGCGTTTGTTTGTTCCGGTGGGGATTTTCAGAAACTCTTTCAGCATGATACATCGCTTTGCCAGACAAGTGACTGTCTATGAATAAGTCTTTGAAATCATTCATTCAGCGAAAATAGACTGTCTATATAAGCGAGATTGATTCATGAGCAAAACTAGTGACCATCTATATAAGTGAGTCATTGAATCATTCACACAATTGATTTGTTCTAAAACACTGATAAAAACCACCGCTGGGCTAGCAAATGCAACAGTTGATTCTGGTTTGGATTCATTTGAAATTTGTTTGTTTGCGTAGCAAAAACACACAAATGAAAACTGCATTGCAATATTCTGTCTAAAATGTAAATTACCGTACTCATAATTAAGTTTTTGTTTATTCAGCTGCTGTACAAAAGAAATATCACACTCACTGTCATATTGTTTGTCTGAATATCATGTGATTACCTGCGATATTCGATCAAAACAACAGTAACACCATGTCCTAACCAGACGCGACGCGATGCCGCGACACGATAAAAGGTGTCTGTTGCATGTTAATCGGAGTTTTTGTTCTAACAAGCCACGACGGCGACACTCGACGATTCTACTTTAGAAACGGTTTCTTTGTTTTTTTTTTTTTTTTTTTTTTTTGCGACATCGCGGCTGGAACAACAACACAAAGTATGTAAATGATAATCTCAGGTACTGTTTATGTGCTTTATTTATGTTAAAAACATCTAATGTGAGTTTGAATATCATTTTGTGTGTCTTTAATAGCTGTACTGAAAGCAACAACGGACAGTTCACCTCAGATCTTCAAAATTAATAAAAGGAAACAAGAACGATCAAACGGTCAACTCATTGTGAACAGACAAGTGTATTCTATGACAAAGATTGTTTTCAGTAACTATATATTTTTTTTATGTATATATTTTCAATAATGTTAAAATGGTGTAATATTCATGAATTTGATTATGTACTTACCCATTTCGTTGCGAGTGCCGTTAGTGGAGCTTGCCGAGAGAGCCCGTCCACTTGCTCTTCTGATTGGCTGTGATTTTTGATTGACTTTATCGTGTCTCATAGTCGCGTCGCGTCTGTGGACAGACAAATTGTTTGTCGCTGGAATCTGGTTAGAACACGGTGTAGCAGCCAAGTGCTTGATTAACATTTCGAATCGCACCAGAAATATGTCAGAATTCCAAAGAGCTCACCACAGTTACAAACGGTTCTAAAAGCTACACTTAAAACCAAAATGTTTCCCAAAGATGTCAAAGACTTCTAGTGATGCACTAGTGGGTTGCAACCACTTGTCCTTCACTCGAAGGATGCAATGCATTTAAAATGACTTGCTTTAAATGGCTTCAGAAATTGATAGTTTCCCACAAAACAATTTCCCTATAAATATAACCTGCCTTTCTTACTGTCAACCGACTAAACCATTATTTAGAGAAAAAACATGTGGCGAGGCTGTTATGTTGGCTCTGTGACGCATATGGATGAATTTACTAGAGTATAGATCAACAGCTCCATGACACTTGTCTCATAATCTCCTCCTAAACTCCTCTGTTCACAATGGAGTGAAAATTATACCGTTCTCAAAACTCAGACTGATGGATACACCATTATCATCACAGTTGTGAGTAATTGGGCCTGCTGATAAACAAACTTTGATCTTCTTGCACTTTTCAGATGCAGGGATGTTTGCAGTGCCGTAATTAGATGTTTTTGTGGGTACTTCAACACATTCTGATTATGCATGTCAGAAAGTCATGCATTAACACCCATCATGCTCTTTTTTCACTTAACTGTTGTGTTTGACTACCACGTATTTCCATATTATCGGGTAAAGCAACCACTGAATTATTCATTGCGTAATCAGTAAGGTTGGGTCATACTTGCCCTTCATTGATTTTGGTTTCTGGCACAGCTGGATCAAAGGAGAACATTTTTCATTTGTTTGAACAGCAAAGCCGTTAAGATCTGTTTCCTGTGTTCTCGTTCAACATATGTGATGGCAAAGCTTTGATCAGTCCAGTTCTGCATGAAAATGAGTGTCAGTTTGTATGAATATGCTGAAGCAGCATTCATCCTTGTCATTGCTATGCAGGTTGATGCATGC
>TU37521
GGAGGACTCGCTAATGGCAACACACACACGGGGTTAAATCCAAAACCAAGTTCAAATCTCTGGAACAGCTTCAACAGAACAAGTGGAGGGGGCAGTTCGTGCACATACTGTGGAGGAACACCGGCAATCAATGTACATCTGAAGGCTCCAGGTACAGAAGCGGATATGTGCTGTTCCTGCCTTCCAGTCAGAGCAGCAGATTGTGTTGCTGAAACCAGGGTTATGTGATGCCTTTAGAGACGTCTGGACTGACCCCTGATCACAGCCGAAATGCCCCCATTCCATCACATCTGTGAGAGTCAAGGCAGAAGAGACTAAAATAGAGTTGGAGTCTCCAGAGAGACTGATGCTGAGAGGAATCCACCCAGCATAAACACGACCCACGATCTCCGCAGCCAAAAGATATGAATCGTCAAAAGTCAAAGCGAAACATCTCATAAGCAATGCTTTGTTGTTAGATCCCAAAGGCAAGGCGTTTTATGAGATGAATGGTGAGGTTTGAGATTAAAGCAATAACTGTGAGCATTGAGGATTTTGAAATTGTCCATCCATCATTTATTACAACTGGCTTGTGAGATATTTCCTCAGGATGGGACTTGCTATGACATGAGCAGAACATTTACTGCGCTGAAGCAGTGTTAGAACTGGCTCAAATGGACAGTTTCTTGATCTCTTGATAGAAATCCCATGCTAATTACTGGTTTAATCGGATCTACAGTGGCTTTACATCTCAGATCGCATTGGATTTGATCTCTACAGGGATTTGAAGAACTCTTGCTGAACCATGAAGGAGGCAATCGTGCAGTTTTTCAATGATGTATGGACCCTTGCTTCATCCAAGCATGACCAGAGCATCTACAACACGGTTTGCCTGGTAGTGCTTCTGACTCTGCCGCTGGTTGTGCTCTTCACATCTGTGCTGGTCTGCTGTCATTGTTGCTGCTGTCGTCATGCCAATGGATGTCGGTGCTGTCGCCGCAAAAGCGAGACCTCAGTGACAAATGTGAAATCCGAAAAGAAGAAGAAAAAGAAAAACGGCAGCCAGAACAGTGAAGACTTGTGGATCTCTGTCAAAGCAGATCCCATGAGTAGTGACAGACTTGCACTCACTATGGTGTAAAAAGCCACATTGAACATGAGCAATTTTATATTTATTTATCTTTATGGTACATGTAAAGGTACAAAAGTGTTACAGCAGTGTTTACTTAAAATGTGCCTGAATGTAAAAAGAAAGAGAGAATTTCAAGAGACTTTTTGTATATAAATGAAATTTGGGAGTGAATGAATGTGCAAGAATATGTTATATGATGTGTGTGTGGTCCTGAAAAGCTTTCCCATAACCCACATTTTAGGTGAAAAGAAATGCAAATCTGTCATTATACAACAGTTAATCCGGGGCCTTGGATTTGATTTCCTGAGCTGTGTTTTTGCATTTGACTGCACTGATTTACTATTGATTTTTTGTGTAAACATGCTCTAGAGCATTATTGTGCTCACGCCTTTCTTGAGTCTTGCGCATGACATGGCTTTCTAAAAATGTGGTGGTTAATTAAAAATAGTTCAACTTTAAA

Function

GO:

id name namespace
GO:0016071 mRNA metabolic process biological_process
GO:0000375 RNA splicing, via transesterification reactions biological_process
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile biological_process
GO:0006397 mRNA processing biological_process
GO:0000398 mRNA splicing, via spliceosome biological_process
GO:0016607 nuclear speck cellular_component
GO:0005681 spliceosomal complex cellular_component
GO:0005685 U1 snRNP cellular_component

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU37520 True 215 lncRNA 0.39 1 14030913 14031127
TU37521 True 268 TUCP 0.42 2 14023547 14031127

Expression


Co-expression Network