XLOC_007197 (si:dkey-203a12.2)


Basic Information

Item Value
gene id XLOC_007197
gene name si:dkey-203a12.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 15191176 ~ 15431947 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00014217
attaaaatccattaaaatatatgaaaatatatgtaTTCTCAAATTTGTGAACATTCACATAACTCCACCCATTGGAAGTTTTTCACAAGAACTGAATATTACACAACTCCGCTCAGTGGATGGGAAATAAAGTTCAATAAAAGGAACTCACCACCTCTGAAAGTGATTAATTACTTTGTCAACACGTCGCTGTAAACAAACAACTATGCTGGCGCAGATTGTTCTTCTACTTTCTTTGGCTGCCATGGCAACAGCAGCTGATGATTGTCCTTCAGTGCCAAACTGCAGTCAATACCCCCAGCAACTGCCCATCTGCAACAGGGAATATAGGCCTGTATGTGGTACAGATGGAATTACGTACCCAAACGAGTGCGTGCTGTGTGCGACTATTTTTAAGGAAAAGCTCAACATCATATTAATCTCCAAAAAGGGTGAATGCTGAGCCAGATCCACTCAGCTTATTTGGGATGACGTGAAGGCTGGAACTAAGTGTTGCTTTTTGGGTGTTCATCTCAAAGTGAAGAatttgttcctttttaaaatattcaaatcttTAAATAAACTCTTGATATACAAGTCAGTGTTTTGTTATTTGAATTCTGATAGTGGAACCTCTGGAAAAATTAAACTATGAGTTCTAataaaatggtcacactttacaataaggttcattagttaatgttaattaatgcatttactaacatgaacaaaccaaaaacaatacatttactactgtatttgttcatgttagttaacattagttaatgaaaatacagttgttcattgttcaagttaactcatggtgcattaactaatgtcaacaagcatggacttgaatgttaataatgcattagtaaatgttcaattatgattaataatgctgtacatgtgttggtcatgattagttcatgttagtaaatgcattatctaaGAAAccatattgtaaaatgttaccaataAAATGTTGTCTTGATCAAATAAAGAGGATATGTCTATAAAGCCCTTAGTGtagttaaattaaatgtttgtggaacagtttcacttttttttacaaagttgTTTGAAAGAATAGAGTGAACGTCATTC
>TCONS_00014218
attaaaatccattaaaatatatgaaaatatatgtaTTCTCAAATTTGTGAACATTCACATAACTCCACCCATTGGAAGTTTTTCACAAGAACTGAATATTACACAACTCCGCTCAGTGGATGGGAAATAAAGTTCAATAAAAGGAACTCACCACCTCTGAAAGTGATTAATTACTTTGTCAACACGTCGCTGTAAACAAACAACTATGCTGGCGCAGATTGTTCTTCTACTTTCTTTGGCTGCCATGGCAACAGCAGCTGATGATTGTCCTTCAGTGCCAAACTGCAGTCAATACCCCCAGCAACTGCCCATCTGCAACAGGGAATATAGGCCTGTATGTGGTACAGATGGAATTACGTACCCAAACGAGTGCGTGCTGTGTGCGACTATTTTTGAGGAAAAGCTCAACATCATATTAATCTCCAAAAAGGGTGAATGCTGAGCCAGATCCACTCAGTTTATTTGGGATGACATGAAGGCTGGAACCATGTGTTGCTTTTTACTGGGTTTTCATCTCAAAATGAAGAATTTGTTCCTTTTTAAAGTATTAATCTTTGAATAAACCCTTGATATACAAGTCAGTGTTTTGTTATTTGAATTCTGATTGTAAAACATCTGGAAAAATTCAACTATGAGGTCTAATAAAATGTTGTCTTGAGTGTTACATTTTT
>TCONS_00014219
TCCGCTCAGTGGATGGGAAATAAAGTTCAATAAAAGGAACTCACCACCTCTGAAAGTGATTAATTACTTTGTCAACACGTCGCTGTAAACAAACAACTATGCTGGCGCAGATTGTTCTTCTACTTTCTTTGGCTGCCATGGCAACAGCAGCTGATGATTGTCCTTCAGTGCCAAACTGCAGTCAATACCCCCAGCAACTGCCCATCTGCAACAGGGAATATAGGCCTGTATGTGGTACAGATGGAATTACGTACCCAAACGAGTGCGTGCTGTGTGCGACTATTTTTAAGGAAAAGCTCAACATCATATTAATCTCCAAAAAGGGTGAATGCTGAGCCAGATCCACTCAGTTTATTTGGGATGACGTGAAGGCTGGAACTATGTGTGGCTTTTTACTGGGTGTTCATCTCAAAATGAAgaatttgttcttttttaaaatattcaaatcttTAAATAAACCCTTGATGTACAAGTCAGTGTTTTGTTATTTGAATTCTGGTTATTTGAACCTCTGGAATAATTAAACTATGAGGTCTAATAAAA
>TCONS_00014221
TCCGCTCAGTGGGTGGGAAATAAAGTTCAATAAAAGGAACTCACCACCTCTGAAAGTGATTAATTACTTTGTCAACACGTCGCTGTAAACAAACAACTATGCTGGCGCAGATTGTTCTTCTACTTTCTTTGGCCGCCATGGCAACAGCAGCTGATGATTGTCCTTCAGTGCCAAACTGCGGTAAATACCACCTGCCCGCCTGCACCATGGATTATAGGCCTGTGTGTGGTACAGATGGGAATACATATGGAAATGAATGCGTGCTGTGTGGGAATATTTTTAAGGAAAAGCTCAACATCATATTAATCTCCAAAAAGGGTGAATGCTGAGCCAGATCCACTCAGCTTATTTGGGATGACGTGAAGGCTGGAACTAAGTGTTGCTTTTTGGGTGTTCATCTCAAAGTGAAGAatttgttcctttttaaaatattcaaatcttTAAATAAACTCTTGATATACAAGTCAGTGTTTTGTTATTTGAATTCTGATAGTGGAACCTCTGGAAAAATTAAACTATGAGTTCTAataaaa
>TCONS_00014222
GGTCTGTGGGTGggaaataaagtttaataaaagGAACTCACCACCGCTGAAAGTGATTAATTACTTTGTCAACTCGTCGCTGTAAACAAACAACTATGCTGGCGCAGATTGTTCTTCTGCTTTGTTTGTCAGCCATGGCAACAGCAGCTGATGATTGTCCTACAGTGCCAAACTGCAGTCAATACCACCTGCCCGCCTGCACCAAGGAATATTGGCCTGTGTGTGGTACAGATGGAAATACATATGGAAATGAGTGCGTGCTGTGTGCAAAAATTCTTGAGGAAAAGCTCAACATCATATTAATCTCCAAAAAGGGTGAATGCTGAGCCAGATCCACTCAGTTTATTTGGGATGACATGAAGGCTGGAACCATGTGTTGCTTTTTACTGGGTTTTCATCTCAAAATGAAGAATTTGTTCCTTTTTAAAGTATTAATCTTTGAATAAACCCTTGATATACAAGTCAGTGTTTTGTTATTTGAATTCTGATTGTAAAACATCTGGAAAAATTCAACTATGAGGTCTAATAAAATGTTGTCTTGAGTG
>TCONS_00014223
taaaagGAACTCACCACCGCTGAAAGTGATTAATTACTTTGTCAACTCGTCGCTGTAAACAAACAACTATGCTGGCGCAGATTGTTCTTCTGCTTTGTTTGTCAGCCATGGCAACAGCAGCTGATGATTGTCCTTTAGTGcCAAACTGCGGTAAATACCACCTGCTCCTGCCCGCCTGCACCGATGATTATACGCCTGTGTGTGGTACAGATGGAATTACGTACCCAAATGAGTGCAATCTGTGTGCGACTATTTTTAAGGAAATGCTCAACATCATATTAATCTCCAAAAAGGGTGAATGCTGAGCCAGATCCACTCAGCTTATTTGGGATGACGTGAAGGCTGGAACTAAGTGTTGCATTTTACTGGGTTTTCATCTCAAAATGAAGAATTTGttcctttttaaagtttttaaatctttaaataaaccCTTGATATACAGTACAAgtcattgttttgttatttgaatTCTGTTAgtggagcctctgaaataattaAACTATGAGGAAACTAATAAAATGTTGTCTAGAGTATTCAAATTCTATCATGACTCTGGAGATGCTTATGGGTTTTTTTCTCTTGGGGAgtttac
>TCONS_00014224
GTCTGTGGGTGGGAAAAAAGTGCAATAAAAGGAGCTCACCACCTCTGAAAGTGATTAATTGCTTTGTCAACACTTAACTGTAAACAAACAACTATGCTGGCGCTGATTGTTCTTTTGCTTTGTTTGTCAGCCATGGCAACAGCAGCTGATGATTGTCCTTCAGTGCCAAATTGCAGTCAATACCAACTGCCCGCCTGCACCAAGGAGTATGCGCCTGTGTGTGGTACAGATGGAAATACATATGCAAATGAGTGCGTGCTGTGTGTGAAAATTTTTTTGGAAAAGCTCAACATCATATTAATCTCCAAAAAGGGTGAATGCTGAACCAGATCCACTTAACTTATTTGGGATGAAGTGAAGGCTGGAACTATGTGTGGCTTTTTACAGGGTTTTCATCTCAAATTCAAATCTTTAAATAAACCCTTGATATACAAGTCAGTGTTTTGTTATTTGAATTCTGATAGTGGAGCCTCtggaaaaattaaacaatgaggtGTAAAAAAAA
>TCONS_00014226
GATTAATTGCTTTGTCAACACTTAACTGTAAACAAACAACTATGCTGGCGCTGATTGTTCTTTTGCTTTGTTTGTCAGCCATGGCAACAGCAGCTGATGATTGTCCTTCAGTGcCAAACTGCGGTAAATACCACCTGCTCCTGCCCGCCTGCACCGATGATTATACGCCTGTGTGTGGTACAGATGGAATTACGTACCCAAATGAGTGCAATCTGTGTGCGACTATTTTTAAGGAAATGCTCAACATCATATTAATCTCCAAAAAGGGTGAATGCTGAGCCAGATCCACTCAGCTTATTTGGGATGACGTGAAGGCTGGAACTAAGTGTTGCATTTTACTGGGTTTTCATCTCAAAATGAAGAATTTGttcctttttaaagtttttaaatctttaaataaaccCTTGATATACAGTACAAgtcattgttttgttatttgaatTCTGTTAgtggagcctctgaaataattaAACTATGAGGAAACTAATAAAATGTTGTCTAGAGTATTCAAATTCTATCATGACTCTGGAGATGCTTATGGGTTTTTTTCTCTTGGGGAgtttac
>TCONS_00014225
GATTAATTGCTTTGTCAACACTTAACTGTAAACAAACAACTATGCTGGCGCTGATTGTTCTTTTGCTTTGTTTGTCAGCCATGGCAACAGCAGCTGATGATTGTCCTTTAGTGcCAAACTGCGGTAAATACCACCTGCTCCTGCCCGCCTGCACCGATGATTATACGCCTGTGTGTGGTACAGATGGAATTACGTACCCAAATGAGTGCAATCTGTGTGCGACTATTTTTAAGGAAATGCTCAACATCATATTAATCTCCAAAAAGGGTGAATGCTGAGCCAGATCCACTCAGCTTATTTGGGATGACGTGAAGGCTGGAACTAAGTGTTGCATTTTACTGGGTTTTCATCTCAAAATGAAGAATTTGttcctttttaaagtttttaaatctttaaataaaccCTTGATATACAGTACAAgtcattgttttgttatttgaatTCTGTTAgtggagcctctgaaataattaAACTATGAGGAAACTAATAAAATGTTGTCTAGAGTATTCAAATTCTATCATGACTCTGGAGATGCTTATGGGTTTTTTTCTCTTGGGGAgtttac
>TCONS_00014227
TCCGCTCAGTGGGTGGGAAATAAAGTTCAATAAAAGGAACTCACCACCTCTGAAAGTGATTAATTACTTTGTCATCACATCGCTGTAAACAAACAACTATGCTGGCACAGATTTTTCTTCTACTTTCTTTGGCTGCCATGGCAACAGCAGCTGATGATTGTCCTTTAGTGcCAAACTGCGGTAAATACCACCTGCTCCTGCCCGCCTGCACCGATGATTATACGCCTGTGTGTGGTACAGATGGAATTACGTACCCAAATGAGTGCAATCTGTGTGCGACTATTTTTAAGGAAATGCTCAACATCATATTAATCTCCAAAAAGGGTGAATGCTGAGCCAGATCCACTCAGCTTATTTGGGATGACGTGAAGGCTGGAACTAAGTGTTGCATTTTACTGGGTTTTCATCTCAAAATGAAGAATTTGttcctttttaaagtttttaaatctttaaataaaccCTTGATATACAGTACAAgtcattgttttgttatttgaatTCTGTTAgtggagcctctgaaataattaAACTATGAGG

Function

GO:

id name namespace
GO:0004867 serine-type endopeptidase inhibitor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-141216-169 Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to act upstream of or within negative regulation of peptidase activity. Human ortholog(s) of this gene implicated in spermatogenic failure 29. Orthologous to human SPINK2 (serine peptidase inhibitor Kazal type 2).
ZDB-GENE-141216-190 Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to act upstream of or within negative regulation of peptidase activity. Human ortholog(s) of this gene implicated in spermatogenic failure 29. Orthologous to human SPINK2 (serine peptidase inhibitor Kazal type 2).
ZDB-GENE-091118-100 Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to act upstream of or within negative regulation of peptidase activity. Human ortholog(s) of this gene implicated in spermatogenic failure 29. Orthologous to human SPINK2 (serine peptidase inhibitor Kazal type 2).
ZDB-GENE-141216-151 Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to act upstream of or within negative regulation of peptidase activity. Human ortholog(s) of this gene implicated in spermatogenic failure 29. Orthologous to human SPINK2 (serine peptidase inhibitor Kazal type 2).
ZDB-GENE-141216-153 Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to act upstream of or within negative regulation of peptidase activity. Human ortholog(s) of this gene implicated in spermatogenic failure 29. Orthologous to human SPINK2 (serine peptidase inhibitor Kazal type 2).

Ensembl:

ensembl_id ENSDARG00000099673 ENSDARG00000099689 ENSDARG00000102271 ENSDARG00000102868 ENSDARG00000103336

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00014217 False 1086 mRNA 0.33 4 15191176 15232400
TCONS_00014218 False 671 mRNA 0.37 4 15191176 15258549
TCONS_00014219 False 543 mRNA 0.39 4 15191283 15192155
TCONS_00014221 False 533 mRNA 0.39 4 15231097 15231960
TCONS_00014222 False 545 mRNA 0.39 4 15257658 15258539
TCONS_00014223 False 592 mRNA 0.39 4 15257685 15431947
TCONS_00014224 False 505 mRNA 0.39 4 15331486 15332339
TCONS_00014226 False 565 mRNA 0.38 4 15331538 15431947
TCONS_00014225 False 565 mRNA 0.38 4 15331538 15431947
TCONS_00014227 True 537 mRNA 0.39 4 15430991 15431862

Neighbor

gene id symbol gene type direction distance location
XLOC_007196 spink2.1 coding upstream 34452 15155684 ~ 15156724 (+)
XLOC_007195 NA coding upstream 35760 15154583 ~ 15155416 (+)
XLOC_007194 nkx1.2lb coding upstream 122614 15064870 ~ 15068562 (+)
XLOC_007193 NA coding upstream 194251 14992577 ~ 14996925 (+)
XLOC_007192 BX119314.1 coding upstream 281506 14909553 ~ 14909670 (+)
XLOC_007202 CR382326.1 coding downstream 52597 15484544 ~ 15485787 (+)
XLOC_007203 spink2.4 coding downstream 63141 15495088 ~ 15495844 (+)
XLOC_007204 si:dkey-203a12.7 coding downstream 111384 15543331 ~ 15544198 (+)
XLOC_007205 spink2.5 coding downstream 165102 15597049 ~ 15597806 (+)
XLOC_007206 si:dkey-203a12.9 coding downstream 188693 15620640 ~ 15625544 (+)
XLOC_007191 NA non-coding upstream 305045 14866579 ~ 14886131 (+)
XLOC_007188 NA non-coding upstream 350017 14835312 ~ 14841159 (+)
XLOC_007207 NA non-coding downstream 308036 15739983 ~ 15746418 (+)
XLOC_007211 NA non-coding downstream 636410 16068357 ~ 16069533 (+)
XLOC_007215 NA non-coding downstream 786018 16217965 ~ 16221450 (+)
XLOC_007217 NA non-coding downstream 874673 16306620 ~ 16309531 (+)
XLOC_007227 CU302200.1 non-coding downstream 1989721 17421668 ~ 17482154 (+)

Expression


Co-expression Network