G138199 (plk3,LOC107563563,LOC107722069,LOC107658359,LOC107726922,LOC107557223)


Basic Information

Item Value
gene id G138199
gene name plk3,LOC107563563,LOC107722069,LOC107658359,LOC107726922,LOC107557223
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 1050532 ~ 1101493 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU186973
CAAATGAAACACAGttttttaaattagttttccTTCTGATACAGATATTATTAAAGAGTATAATACCATTGATCAGGCAAAAAAAGCTTATACCACGGGTTTGTCTGTAGTGACATGAAACCCAGGGGACTTTAAACCCATGAAAATAATCGATCAATCAATCATATTGAAGCACAacaatatcatgataatatccATATGCCTTTTTCTGATCCCTCCTTTTGTTATTCGAGCTTGAGGTTCAGAAGGGCCATTATTGCACAACCCAGACAAACGTCAACGAAGAAAGGCACTTTACGCTCCCCTCCACGCCTCACTGCGGGTCCTTCACTGCGCAGAATTCGCCACCCTCCTCCGCCAGCTTTAAAATAAACCTTTCTCCTGAAAATAAACTCTCGGAAGTCTAAAGCCGTCCATATCTGGCGTGTAGCTCTGTAAAATAAACCTCTACACGTCTGGAACTTTGagaaaaaggaggagaagaagaagaaagaaatggaAGGCTCGTGGTCGAAGCATAAAACGCCAGGCTCCTCTGCTCCTCTGCCTGGTTTCTGATTGGTTTCATCTTGAGTAGTAGAAGACGTTCAGTTCAGCACTCTTCACAATGTTCAAGCCCCTCCCACAATGTTGAAGCCCCTCCCACCAGTCCAGCTGAAAGAACGGGCCGAgtgctgtgttgtgtgtttgcaCGTCACGTCGGTAGTGTAAGTGTCAGGCGTCGGGTCAAGTATTAAAGGAAAAGTCCAGAACGTTGCACGGTgcgtcccatgacttctggttCCAGCCTTTGTTTAAGTccttttgatattttattttttgtattatttttttagcagcAAGTGTTGATGGCACGCAGCCCAAGCTTTTTTTATTGGGGGTTTGGGGGTTCGGTCACGCGCTGGCGTAGTGCTGCAGCAGCTGCACCACGTAATGCAGGCGGTGGCGCAGCTCCGACGAGCAGCCGCTCTCACTGAGCACGTGCAGAGGGTAGGAGGTGGACACGCGCTCCCGGCTGATGTACGTCAGCAGGTAGGAGGAGTCTGCAGACTTGCTCAGGATGACCTTCGTGTGGTCAGCGTAAAAGTTCACCTGTACTGAGCCGTTGTTGAAGAGCATGACCAGGGCATGTTCAGTTTTTATCCACTGCAGGAGAAGAGGTGGAGATGCAGAAGGAGGCGGCTGCTCCTCGAACCCCAGATCTCCTCCctcCATCAGATTCTGCTCCATGTATTTGGCCATGAGTTCCACGATGTGTTTCTGCCTCTGAAGAGGTTCAGGTAACGAATCAGCTTGAAAAGTGAAGtgtttgttgttggtcaggCAGTAATGCACCGTTCTGCGCTGATCACACAGGCTCAGGTGAGTCCCTTCGTTAAAGAGGACCCCGACGTTCTGATTGGACAGCTGATATCCGAAGCCGTACTTGTTGGAGTAATCCACCCACTTGCTCACCCACAGGAAAGGCTGAGGTTTCTCCAGACACGGAGGGTTTTtcgaagCTGTCGGCATGGTGGATAAGCAGCTGGTGAGAACCTTCTTGGCCGCTTCAGCCACAGCTGCTGGAGTCAAGGTGCCTTCACCTGCGTCAGTGCTGCTGGCCACTGTGCCTTTAAACGAGCGAGGAGCTGATTTTCTGGACTCTTCTTCACCCGGTGTGTCCAGAGGTCCAGAGCTGGCCAGCTGACCCACAGGAGAGGGAGCCTCATTCACCCCCACGGTCTTGTAGCTGATCTGCCGGCTGATGGAGTGCTTCACCATGCCGGACACAAGCTTCGAGATGTCCTCCTTATCTTCACTGGGCTTTTTCTCTACTTTGGACTTCTTTTTGCCGAATAAGCTCTTGGCCATTTTGGTGAAGAACTTCTTGGCAGGACTGGGTGGGCTGAGCTCTGGGACCATCACACAGGAGCTGGGGGGAAGTTTGTCTGGAGTAAAGCCCTTGCTGAAGTACTCGTGGACCAGAATCTGGTCGAGAGTGAGGCGGTCGCTGGGGTTTTTCTGCAGGACGGCGGAGATTAGCTTCTGTGCCGCTGGTGAAAGTGAAGGCGGGAGACTGTATCTCACTTCCTTTATGCATTTGTACGTTTCTTTCAAGTCTAAGGTTTCAAACGGAGGGTTTCCACACAGCAGCGTGTACCTGaacagcacagaaacacagagcaaAGGTTA

Function

symbol description
plk3 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in Golgi disassembly; cellular response to DNA damage stimulus; and regulation of cell cycle process. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm; microtubule cytoskeleton; and nucleus. Is expressed in liver; spinal cord; and spleen. Orthologous to human PLK3 (polo like kinase 3).

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU186973 True 2172 TUCP 0.50 10 1050532 1101493

Neighbor

gene id symbol gene type direction distance location
tnn NA coding downstream 24066 991893 ~ 1026466 (-)
pappa2 NA coding downstream 299952 718023 ~ 750580 (-)
brinp2 brinp2,LOC107720848,LOC107658350,LOC107700985,LOC107562711,LOC107722070 coding downstream 626744 286350 ~ 423788 (-)
cenpl cenpl coding downstream 873866 173241 ~ 176666 (-)
eif2b3 eif2b3,ei2bg,LOC107720854,LOC107700990,LOC107722074,LOC107599900 coding downstream 904327 127085 ~ 146205 (-)
shh shh,LOC108411758 coding upstream 243571 1345064 ~ 1360413 (-)
lmbr1 lmbr1,LOC107742132,LOC106578611 coding upstream 353960 1455453 ~ 1487674 (-)
LOC111194257 LOC108430781,LOC108267757,LOC107591375 coding upstream 390323 1491816 ~ 1497588 (-)
dcaf8 dcaf8,LOC107706361,LOC107659382,LOC107738146 coding upstream 409140 1510633 ~ 1523685 (-)
LOC111194258 NA coding upstream 437610 1539103 ~ 1546999 (-)
G138198 NA non-coding downstream 3134 1046296 ~ 1047398 (-)
G138196 cacybp non-coding downstream 5853 1041533 ~ 1044679 (-)
G138195 NA non-coding downstream 11450 1037867 ~ 1039082 (-)
G138166 NA non-coding downstream 185761 857948 ~ 864771 (-)
G138160 rfwd2,LOC107658354,LOC107726924 non-coding downstream 269999 775619 ~ 780533 (-)
G138209 LOC108412812 non-coding upstream 115981 1217474 ~ 1218913 (-)
G138226 NA non-coding upstream 148219 1249712 ~ 1250937 (-)
LOC111194256 NA non-coding upstream 169318 1270811 ~ 1299166 (-)
G138231 NA non-coding upstream 196861 1298354 ~ 1368873 (-)
G138254 NA non-coding upstream 256267 1357760 ~ 1450758 (-)
LOC111194217 pappa2,LOC107722077,LOC107678935,LOC107726923,LOC107658303,LOC107558342 other downstream 333209 695903 ~ 717323 (-)
LOC103042176 zgc:55943,c7h1orf21,LOC103042176,LOC108430752,LOC107709356,LOC107671715,LOC107559369,LOC107593773,LOC107727521 other upstream 1376202 2477695 ~ 2486894 (-)
LOC103045355 LOC108430731 other upstream 1948907 3050400 ~ 3062759 (-)
LOC103025790 NA other upstream 1994108 3095601 ~ 3114686 (-)
gipc2 gipc2,dnajb4,LOC108430720 other upstream 2055257 3156750 ~ 3175353 (-)
G138708 NA other upstream 2731228 3832721 ~ 3833670 (-)

Expression


Co-expression Network