G138264


Basic Information

Item Value
gene id G138264
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 1489342 ~ 1489632 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU187056
CTGCATTCTCCCTCTTCAGCTCTTCCACCAAAGAGTTCAGTAGAGTCACTGTGGTGTCCTGGCTCTTCAGTCTCTCCTCTATAAGCTTTATTTTCTCCAGTTCAGCAATAATGTTTACACTGGGTGACATGAATTCCTGTGCCCTTCCTCCCCACGAGCAGATCAGCAGCAGCGCTGACAGCATCAGATTCATCTCCATATTCCTCAACATCTCTGATAGAGTCTGATAGAATCAGTGTCTGATCTGAGGCAATTCAGGATTTAATGTAGATAAAAATAGATCGATTTAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU187056 True 291 lncRNA 0.43 1 1489342 1489632

Neighbor

gene id symbol gene type direction distance location
lmbr1 lmbr1,LOC107742132,LOC106578611 coding downstream 1668 1455453 ~ 1487674 (-)
shh shh,LOC108411758 coding downstream 128929 1345064 ~ 1360413 (-)
trove2 trove2 coding downstream 386535 1090237 ~ 1102807 (-)
tnn NA coding downstream 462876 991893 ~ 1026466 (-)
pappa2 NA coding downstream 738762 718023 ~ 750580 (-)
LOC111194257 LOC108430781,LOC108267757,LOC107591375 coding upstream 2184 1491816 ~ 1497588 (-)
dcaf8 dcaf8,LOC107706361,LOC107659382,LOC107738146 coding upstream 21001 1510633 ~ 1523685 (-)
LOC111194258 NA coding upstream 49471 1539103 ~ 1546999 (-)
LOC103023075 kcnt2 coding upstream 162842 1652474 ~ 1681323 (-)
LOC103045138 NA coding upstream 206113 1695745 ~ 1700670 (-)
G138254 NA non-coding downstream 38584 1357760 ~ 1450758 (-)
G138231 NA non-coding downstream 120469 1298354 ~ 1368873 (-)
LOC111194256 NA non-coding downstream 190176 1270811 ~ 1299166 (-)
G138226 NA non-coding downstream 238405 1249712 ~ 1250937 (-)
G138209 LOC108412812 non-coding downstream 270429 1217474 ~ 1218913 (-)
G138266 NA non-coding upstream 1296 1490928 ~ 1491686 (-)
G138253 NA non-coding upstream 18360 1507992 ~ 1509496 (-)
G138268 NA non-coding upstream 42368 1532000 ~ 1533564 (-)
G138272 cdc73 non-coding upstream 79205 1568837 ~ 1574707 (-)
G138273 NA non-coding upstream 103786 1593418 ~ 1594042 (-)
G138199 plk3,LOC107563563,LOC107722069,LOC107658359,LOC107726922,LOC107557223 other downstream 387849 1050532 ~ 1101493 (-)
LOC111194217 pappa2,LOC107722077,LOC107678935,LOC107726923,LOC107658303,LOC107558342 other downstream 772019 695903 ~ 717323 (-)
LOC103042176 zgc:55943,c7h1orf21,LOC103042176,LOC108430752,LOC107709356,LOC107671715,LOC107559369,LOC107593773,LOC107727521 other upstream 988063 2477695 ~ 2486894 (-)
LOC103045355 LOC108430731 other upstream 1560768 3050400 ~ 3062759 (-)
LOC103025790 NA other upstream 1605969 3095601 ~ 3114686 (-)
gipc2 gipc2,dnajb4,LOC108430720 other upstream 1667118 3156750 ~ 3175353 (-)
G138708 NA other upstream 2343089 3832721 ~ 3833670 (-)

Expression


Co-expression Network