G138657


Basic Information

Item Value
gene id G138657
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 3599263 ~ 3599510 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU187650
AACATactcagcccaatggggctctagagtctgtagaatgaactttagtttaagttaaaggtccgtgcagcctcagccctcagctccccattCAAGAGACTcttcagtgagctgaggctgagttttatacctgtctcagccggctgcttaatcagtcctgaatgcacaccggctgggacagacatggctgtgagttccggcgtggggcggacccacggttcccccgcctcctcacgccacaatatata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU187650 True 248 lncRNA 0.54 1 3599263 3599510

Neighbor

gene id symbol gene type direction distance location
usp33 usp33,LOC107708728,LOC107751869 coding downstream 63858 3504576 ~ 3535405 (-)
zzz3 zzz3,LOC107558175,LOC104950552 coding downstream 95441 3479968 ~ 3503822 (-)
pigk pigk,LOC107751867,LOC107599845 coding downstream 182954 3381575 ~ 3416309 (-)
dnajb4 dnajb4,LOC108430719,LOC107599850,LOC107751861,LOC107681825,LOC107690981,LOC107566472 coding downstream 414728 3177666 ~ 3184535 (-)
LOC107197653 NA coding downstream 448386 3119979 ~ 3150877 (-)
LOC103031087 dia1a,LOC108437525,LOC107681802,LOC107599840,LOC107722302,LOC107565821,LOC108268022 coding upstream 123227 3722737 ~ 3759982 (-)
LOC103031615 NA coding upstream 193818 3793328 ~ 3796794 (-)
LOC103032259 si:ch211-38m6.6,LOC108437504,LOC107656858,LOC107722537,LOC107565819,LOC107681768,LOC108267997,LOC107599859 coding upstream 375300 3974810 ~ 3990263 (-)
LOC103021848 LOC103021848,LOC108437503 coding upstream 403315 4002825 ~ 4016139 (-)
eif4a2 eif4a2,LOC108267852,LOC107568626,LOC107593804,LOC105889495 coding upstream 469268 4068778 ~ 4074278 (-)
G138651 LOC103030773,LOC108437505,LOC108267627,LOC107558181 non-coding downstream 666 3585184 ~ 3598597 (-)
G138650 miga1,LOC107708777,LOC107722319 non-coding downstream 30609 3540971 ~ 3568654 (-)
G138563 cope,LOC107690966,LOC107709006 non-coding downstream 399153 3194593 ~ 3200110 (-)
G138515 txndc12,LOC107690994,LOC107566463,LOC107708672 non-coding downstream 443208 3150921 ~ 3156055 (-)
G138493 aldh9a1,LOC108267615,LOC108430735,LOC107681718,LOC107593789,LOC105891333 non-coding downstream 575891 3022115 ~ 3023372 (-)
G138659 NA non-coding upstream 16283 3615793 ~ 3616014 (-)
G138662 NA non-coding upstream 64266 3663776 ~ 3664008 (-)
G138706 NA non-coding upstream 231157 3830667 ~ 3831292 (-)
G138716 NA non-coding upstream 241889 3841399 ~ 3841780 (-)
G138794 NA non-coding upstream 341126 3940636 ~ 3942474 (-)
gipc2 gipc2,dnajb4,LOC108430720 other downstream 423910 3156750 ~ 3175353 (-)
LOC103025790 NA other downstream 484577 3095601 ~ 3114686 (-)
LOC103045355 LOC108430731 other downstream 536504 3050400 ~ 3062759 (-)
LOC103042176 zgc:55943,c7h1orf21,LOC103042176,LOC108430752,LOC107709356,LOC107671715,LOC107559369,LOC107593773,LOC107727521 other downstream 1112369 2477695 ~ 2486894 (-)
G138199 plk3,LOC107563563,LOC107722069,LOC107658359,LOC107726922,LOC107557223 other downstream 2497770 1050532 ~ 1101493 (-)
G138708 NA other upstream 233211 3832721 ~ 3833670 (-)
LOC103047802 pcolce2a,LOC108437522,LOC108268019 other upstream 248212 3847722 ~ 3861356 (-)
LOC103034146 zgc:110366,LOC108267892,LOC108437513,LOC105007548 other upstream 731361 4330871 ~ 4338197 (-)
G139074 NA other upstream 1676596 5276106 ~ 5276468 (-)
G139105 NA other upstream 1730568 5330078 ~ 5330805 (-)

Expression


Co-expression Network