G138659


Basic Information

Item Value
gene id G138659
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 3615793 ~ 3616014 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU187652
atcactcctagggtgatgtccgcagcacagggcgtctgtgagctgatgtatcagaaccgagccgctgcgctttcctctgagcgttagcgctgtgatgctgctcggtaatgctgcatcagcagcagctggaaaagaagcggtggctgacttcacatgtatcagaggaaacatgtgttagtcttcaccctcctggtgtgttggggcatcactagtgataggtgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU187652 True 222 lncRNA 0.54 1 3615793 3616014

Neighbor

gene id symbol gene type direction distance location
usp33 usp33,LOC107708728,LOC107751869 coding downstream 80388 3504576 ~ 3535405 (-)
zzz3 zzz3,LOC107558175,LOC104950552 coding downstream 111971 3479968 ~ 3503822 (-)
pigk pigk,LOC107751867,LOC107599845 coding downstream 199484 3381575 ~ 3416309 (-)
dnajb4 dnajb4,LOC108430719,LOC107599850,LOC107751861,LOC107681825,LOC107690981,LOC107566472 coding downstream 431258 3177666 ~ 3184535 (-)
LOC107197653 NA coding downstream 464916 3119979 ~ 3150877 (-)
LOC103031087 dia1a,LOC108437525,LOC107681802,LOC107599840,LOC107722302,LOC107565821,LOC108268022 coding upstream 106723 3722737 ~ 3759982 (-)
LOC103031615 NA coding upstream 177314 3793328 ~ 3796794 (-)
LOC103032259 si:ch211-38m6.6,LOC108437504,LOC107656858,LOC107722537,LOC107565819,LOC107681768,LOC108267997,LOC107599859 coding upstream 358796 3974810 ~ 3990263 (-)
LOC103021848 LOC103021848,LOC108437503 coding upstream 386811 4002825 ~ 4016139 (-)
eif4a2 eif4a2,LOC108267852,LOC107568626,LOC107593804,LOC105889495 coding upstream 452764 4068778 ~ 4074278 (-)
G138657 NA non-coding downstream 16283 3599263 ~ 3599510 (-)
G138651 LOC103030773,LOC108437505,LOC108267627,LOC107558181 non-coding downstream 17196 3585184 ~ 3598597 (-)
G138650 miga1,LOC107708777,LOC107722319 non-coding downstream 47139 3540971 ~ 3568654 (-)
G138563 cope,LOC107690966,LOC107709006 non-coding downstream 415683 3194593 ~ 3200110 (-)
G138515 txndc12,LOC107690994,LOC107566463,LOC107708672 non-coding downstream 459738 3150921 ~ 3156055 (-)
G138662 NA non-coding upstream 47762 3663776 ~ 3664008 (-)
G138706 NA non-coding upstream 214653 3830667 ~ 3831292 (-)
G138716 NA non-coding upstream 225385 3841399 ~ 3841780 (-)
G138794 NA non-coding upstream 324622 3940636 ~ 3942474 (-)
G138815 NA non-coding upstream 434153 4050167 ~ 4051231 (-)
gipc2 gipc2,dnajb4,LOC108430720 other downstream 440440 3156750 ~ 3175353 (-)
LOC103025790 NA other downstream 501107 3095601 ~ 3114686 (-)
LOC103045355 LOC108430731 other downstream 553034 3050400 ~ 3062759 (-)
LOC103042176 zgc:55943,c7h1orf21,LOC103042176,LOC108430752,LOC107709356,LOC107671715,LOC107559369,LOC107593773,LOC107727521 other downstream 1128899 2477695 ~ 2486894 (-)
G138199 plk3,LOC107563563,LOC107722069,LOC107658359,LOC107726922,LOC107557223 other downstream 2514300 1050532 ~ 1101493 (-)
G138708 NA other upstream 216707 3832721 ~ 3833670 (-)
LOC103047802 pcolce2a,LOC108437522,LOC108268019 other upstream 231708 3847722 ~ 3861356 (-)
LOC103034146 zgc:110366,LOC108267892,LOC108437513,LOC105007548 other upstream 714857 4330871 ~ 4338197 (-)
G139074 NA other upstream 1660092 5276106 ~ 5276468 (-)
G139105 NA other upstream 1714064 5330078 ~ 5330805 (-)

Expression


Co-expression Network