G138830


Basic Information

Item Value
gene id G138830
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 4141468 ~ 4151135 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU187898
aatataatcaagaggaagatggatgatcacaagctgatcatcaaaccaaactgaactgcttgaatttttgcaccaggagtaaagcagcataaagttatccaaaagcagtgtgtaagactggtggagaacatgccaccaaatattgatttctgaattcttaaaactttatgaatatgaacttgttttctttgcattatttgaggtctgaaagctctgcatcttttttgttattttagccattttataTTTAgccatattatattaaata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU187898 True 268 lncRNA 0.32 2 4141468 4151135

Neighbor

gene id symbol gene type direction distance location
LOC111194272 LOC108437516,LOC108267691,LOC107715522,LOC107681815,LOC105889505 coding downstream 19475 4105554 ~ 4121993 (-)
eif4a2 eif4a2,LOC108267852,LOC107568626,LOC107593804,LOC105889495 coding downstream 67190 4068778 ~ 4074278 (-)
LOC103021848 LOC103021848,LOC108437503 coding downstream 125329 4002825 ~ 4016139 (-)
LOC103032259 si:ch211-38m6.6,LOC108437504,LOC107656858,LOC107722537,LOC107565819,LOC107681768,LOC108267997,LOC107599859 coding downstream 151205 3974810 ~ 3990263 (-)
LOC103031615 NA coding downstream 344674 3793328 ~ 3796794 (-)
LOC103023384 LOC108437496 coding upstream 30054 4181189 ~ 4225637 (-)
LOC103024655 NA coding upstream 85534 4236669 ~ 4269902 (-)
LOC103024348 NA coding upstream 92331 4243466 ~ 4245836 (-)
LOC103024967 LOC108437498 coding upstream 130392 4281527 ~ 4289548 (-)
LOC103025293 NA coding upstream 139277 4290412 ~ 4304086 (-)
G138817 dcun1d1,LOC107656862,LOC107568628,LOC107722250,LOC105889496,LOC103032878,LOC107681826,LOC107578399 non-coding downstream 64002 4075500 ~ 4077466 (-)
G138815 NA non-coding downstream 90237 4050167 ~ 4051231 (-)
G138794 NA non-coding downstream 198994 3940636 ~ 3942474 (-)
G138716 NA non-coding downstream 299688 3841399 ~ 3841780 (-)
G138706 NA non-coding downstream 310176 3830667 ~ 3831292 (-)
G138834 NA non-coding upstream 11077 4162212 ~ 4162480 (-)
G138822 NA non-coding upstream 21844 4172979 ~ 4175596 (-)
G138837 NA non-coding upstream 28689 4179824 ~ 4234182 (-)
G138910 NA non-coding upstream 181259 4332394 ~ 4351126 (-)
G138913 NA non-coding upstream 244955 4396090 ~ 4396932 (-)
LOC103047802 pcolce2a,LOC108437522,LOC108268019 other downstream 280112 3847722 ~ 3861356 (-)
G138708 NA other downstream 307798 3832721 ~ 3833670 (-)
gipc2 gipc2,dnajb4,LOC108430720 other downstream 966115 3156750 ~ 3175353 (-)
LOC103025790 NA other downstream 1026782 3095601 ~ 3114686 (-)
LOC103045355 LOC108430731 other downstream 1078709 3050400 ~ 3062759 (-)
LOC103034146 zgc:110366,LOC108267892,LOC108437513,LOC105007548 other upstream 179736 4330871 ~ 4338197 (-)
G139074 NA other upstream 1124971 5276106 ~ 5276468 (-)
G139105 NA other upstream 1178943 5330078 ~ 5330805 (-)
G139489 NA other upstream 1857918 6009053 ~ 6010867 (-)
LOC111194281 NA other upstream 1871474 6022609 ~ 6054733 (-)

Expression


Co-expression Network