G41496


Basic Information

Item Value
gene id G41496
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 3729230 ~ 3734202 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU47105
CGGGATCAGGAAGCAGCGCTGCGTGGGTTATTTTGGGCGCATTGAGTCTGTGAATAGCGCGGCGTCTGCGGATGAGGATCGAAATTTCTCGATGAAAGTGTCCAGCCATTGAATAGAGTCAACTTGAATTCCTGCAACCCTCTCTTAATACAAAACAACAATGTCGTCAACATCACAAAAACACAAGGACTTTGTGGCAGAGCCCATGGGGGAGAAGTCTGTGAATGCACTAGCAGGAATTGGGGAAGTTCTAGGAAAGAGATTGGAAGAGAAGGGCTTTGACAAGGCATATGTTGTCCTAGGACAGTTTCTGGTACTGAGGAAAGATGAGGAGTTGTTTCGGGAATGGTTGAAAGATACATGTGGAGCCAACACCAAACAGCAAGGCGACTGTTATGGCTGTCTGCGAGAGTGGTGTGACTCTTTCCTGTAGTTGACTCTAAAGTTGTTGTATCTTCATCCCCCCCCCATGTATACTGAATACATTTACCTCACACTATCAATTAGACTTTTTTGACATTTATTTTTGGATGTATTAATATTAACTCTTAGCCCAGAATTGTAGAAGCACTAGAAGGTCTCTAGATGGGTACACTTGTTAAATTATCACTGCTTCTTCTTTTTTCAAACATCATTCACACTGGATCTTTAGTTTTCGTGGAATGATACAAATTATCCAAAAATCCACTCATCATATGCAGTTCGATCCCAGACTGTACATATGTGCATACACCAGTAGTGCAAATACACATTTGCAGGGCACAACACAGATTTCACTTTGTTTATGATGCCATTTGCAGGTTTTAACTGGCAATGTGCCGCACTGCTATTAAGCTTTTTAAGGTTTGTGAACTTGTCACTGTTCTCTATATGTATTCTCCAAAGGATCCCATGCTGTGATATTGCCATATGGTTTTATGCTCCCCAACCCTTAAATTGCCTTAATAAAAATATGGATTTGTTTTAACTGTGCATGTGTACCTGAAGATGTGTGGGCTGATTCATTCTGTGTAGTGTAGCCACTTAACTCA
>TU47106
CGGGATCAGGAAGCAGCGCTGCGTGGGTTATTTTGGGCGCATTGAGTCTGTGAATAGCGCGGCGTCTGCGGATGAGGATCGAAATTTCTCGATGAAAGTGTCCAGCCATTGAATAGAGTCAACTTGAATTCCTGCAACCCTCTCTTAATACAAAACAACAATGTCGTCAACATCACAAAAACACAAGGACTTTGTGGCAGAGCCCATGGGGGAGAAGTCTGTGAATGCACTAGCAGGAATTGGGGAAGTTCTAGGAAAGAGATTGGAAGAGAAGGGCTTTGACAAGGCATATGTTGTCCTAGGACAGTTTCTGGTACTGAGGAAAGATGAGGAGTTGTTTCGGGAATGGTTGAAAGATACATGTGGAGCCAACACCAAACAGCAAGGCGACTGTTATGGCTGTCTGCGAGAGTGGTGTGACTCTTTCCTGTAGTTGACTCTAAAGTTGTTGTATCTTCATCCCCCCCCCATGTATACTGAATACATTTACCTCACACTATCAATTAGACTTTTTTGACATTTATTTTTGGATGTATTAATATTAACTCTTAGCCCAGAATTGTAGAAGCACTAGAAGGTCTCTAGATGGGTACACTTGTTAAATTATCACTGCTTCTTCTTTTTTCAAACATCATTCACACTGGATCTTTAGTTTTCGTGGAATGATACAAATTATCCAAAAATCCACTCATCATATGCAGTTCGATCCCAGACTGTACATATGTGCATACACCAGTAGTGCAAATACACATTTGCAGGGCACAACACAGATTTCACTTTGTTTATGATGCCATTTGCAGGTTTTAACTGGCAATGTGCCGCACTGCTATTAAGCTTTTTAAGGTTTGTGAACTTGTCACTGTTCTCTATATGTATTCTCCAAAGGATCCCATGCTGTGATATTGCCATATGGTTTTATGCTCCCCAACCCTTAAATTGCCTTAATAAAAATATGGATTTGTTTTAACTGTGCATGTGTACCTGAAGATGTGTGGGCTGATTCATTCTGTGTAGTGTAGCCACTTAACTCATCTTGGTTGACATCTGCTGCTTTCAGATGTTTAAAATGATATCTGAATGAAACATTGATAAATGTTGTTATGGCTCCAAGGCCATTTTTGAGCCTTTGTGTTTTGCATATTAGTTCTTTTGTAATAAAATCTCAAAAGTAATAACTGGCAGTGGCAGGGTGTGTTGTGAGTGTGTGGAATGAAAGACATTTAAATCCATCTCAACCTGCT
>TU47107
CGGGATCAGGAAGCAGCGCTGCGTGGGTTATTTTGGGCGCATTGAGTCTGTGAATAGCGCGGCGTCTGCGGATGAGGATCGAAATTTCTCGATGAAAGTGTCCAGCCATTGAATAGAGTCAACTTGAATTCCTGCAACCCTCTCTTAATACAAAACAACAATGTCGTCAACATCACAAAAACACAAGGACTTTGTGGCAGAGCCCATGGGGGAGAAGTCTGTGAATGCACTAGCAGGAATTGGGGAAGTTCTAGGAAAGAGATTGGAAGAGAAGGGCTTTGACAAGGCATATGTTGTCCTAGGACAGTTTCTGGTACTGAGGAAAGATGAGGAGTTGTTTCGGGAATGGTTGAAAGATACATGTGGAGCCAACACCAAACAGCAAGGCGACTGTTATGGCTGTCTGCGAGAGTGGTGTGACTCTTTCCTGTAGTTGACTCTAAAGTTGTTGTATCTTCATCCCCCCCCCATGTATACTGAATACATTTACCTCACACTATCAATTAGACTTTTTTGACATTTATTTTTGGATGTATTAATATTAACTCTTAGCCCAGAATTGTAGAAGCACTAGAAGGTCTCTAGATGGGTACACTTGTTAAATTATCACTGCTTCTTCTTTTTTCAAACATCATTCACACTGGATCTTTAGTTTTCGTGGAATGATACAAATTATCCAAAAATCCACTCATCATATGCAGTTCGATCCCAGACTGTACATATGTGCATACACCAGTAGTGCAAATACACATTTGCAGGGCACAACACAGATTTCACTTTGTTTATGATGCCATTTGCAGGTTTTAACTGGCAATGTGCCGCACTGCTATTAAGCTTTTTAAGGTTTGTGAACTTGTCACTGTTCTCTATATGTATTCTCCAAAGGATCCCATGCTGTGATATTGCCATATGGTTTTATGCTCCCCAACCCTTAAATTGCCTTAATAAAAATATGGATTTGTTTTAACTGTGCATGTGTACCTGAAGATGTGTGGGCTGATTCATTCTGTGTAGTGTAGCCACTTAACTCATCTTGGTTGACATCTGCTGCTTTCAGATGTTTAAAATGATATCTGAATGAAACATTGATA
>TU47109
ACCGGATTGGTCCAGTTCTGTTTGCGCCTGACCGTTCACGGACTCATTCAGCCTCAATTAACACCGTCTGTTTCCAATAAATAGCCGGAGCCACCAGGGGTCGGTGTCTCTTTAAATAGGAGCATCGTAAGAGCGGAAGTGGCGATGTTCGTCCTAAAGGCGGGATCAGGAAGCAGCGCTGCGTGGGTTATTTTGGGCGCATTGAGTCTGTGAATAGCGCGGCGTCTGCGGATGAGGATCGAAATTTCTCGATGAAAGTGTCCAGCCATTGAATAGAGTCAACTTGAATTCCTGCAACCCTCTCTTAATACAAAACAACAATGTCGTCAACATCACAAAAACACAAGGACTTTGTGGCAGAGCCCATGGGGGAGAAGTCTGTGAATGCACTAGCAGGAATTGGGGAAGTTCTAGGAAAGAGATTGGAAGAGAAGGGCTTTGACAAGGCATATGTTGTCCTAGGACAGTTTCTGGTACTGAGGAAAGATGAGGAGTTGTTTCGGGAATGGTTGAAAGATACATGTGGAGCCAACACCAAACAGCAAGGCGACTGTTATGGCTGTCTGCGAGAGTGGTGTGACTCTTTCCTGTAGTTGACTCTAAAGTTGTTGTATCTTCATCCCCCCCCCATGTATACTGAATACATTTACCTCACACTATCAATTAGACTTTTTTGACATTTATTTTTGGATGTATTAATATTAACTCTTAGCCCAGAATTGTAGAAGCACTAGAAGGTCTCTAGATGGGTACACTTGTTAAATTATCACTGCTTCTTCTTTTTTCAAACATCATTCACACTGGATCTTTAGTTTTCGTGGAATGATACAAATTATCCAAAAATCCACTCATCATATGCAGTTCGATCCCAGACTGTACATATGTGCATACACCAGTAGTGCAAATACACATTTGCAGGGCACAACACAGATTTCACTTTGTTTATGATGCCATTTGCAGGTTTTAACTGGCAATGTGCCGCACTGCTATTAAGCTTTTTAAGGTTTGTGAACTTGTCACTGTTCTCTATATGTATTCTCCAAAGGATCCCATGCTGTGATATTGCCATATGGTTTTATGCTCCCCAACCCTTAAATTGCCTTAATAAAAATATGGATTTGTTTTAACTGTGCATGTGTACCTGAAGATGTGTGGGCTGATTCATTCTGTGTAGTGTAGCCACTTAACTCA
>TU47110
CGGGATCAGGAAGCAGCGCTGCGTGGGTTATTTTGGGCGCATTGAGTCTGTGAATAGCGCGGCGTCTGCGGATGAGGATCGAAATTTCTCGATGAAAGTGTCCAGCCATTGAATAGAGTCAACTTGAATTCCTGCAACCCTCTCTTAATACAAAACAACAATGTCGTCAACATCACAAAAACACAAGGACTTTGTGGCAGAGCCCATGGGGGAGAAGTCTGTGAATGCACTAGCAGGAATTGGGGAAGTTCTAGGAAAGAGATTGGAAGAGAAGGGCTTTGACAAGGCATATGTTGTCCTAGGACAGTTTCTGGTACTGAGGAAAGATGAGGAGTTGTTTCGGGAATGGTTGAAAGATACATGTGGAGCCAACACCAAACAGCAAGGCGACTGTTATGGCTGTCTGCGAGAGTGGTGTGACTCTTTCCTGTAGTTGACTCTAAAGTTGTTGTATCTTCATCCCCCCCCCATGTATACTGAATACATTTACCTCACACTATCAATTAGACTTTTTTGACATTTATTTTTGGATGTATTAATATTAACTCTTAGCCCAGAATTGTAGAAGCACTAGAAGGTCTCTAGATGGGTACACTTGTTAAATTATCACTGCTTCTTCTTTTTTCAAACATCATTCACACTGGATCTTTAGTTTTCGTGGAATGATACAAATTATCCAAAAATCCACTCATCATATGCAGTTCGATCCCAGACTGTACATATGTGCATACACCAGTAGTGCAAATACACATTTGCAGGGCACAACACAGATTTCACTTTGTTTATGATGCCATTTGCAGGTTTTAACTGGCAATGTGCCGCACTGCTATTAAGCTTTTTAAGGTTTGTGAACTTGTCACTGTTCTCTATATGTATTCTCCAAAGGATCCCATGCTGTGATATTGCCATATGGTTTTATGCTCCCCAACCCTTAAATTGCCTTAATAAAAATATGGATTTGTTTTAACTGTGCATGTGTACCTGAAGATGTGTGGGCTGATTCATTCTGTGTAGTGTAGCCACTTAACTCATCTTGGTTGACATCTGCTGCTTTCAGATGTTTAAAATGATATCTGAATGAAACATTGATAAATGTTGTTATGGCTCCAAGGCCATTTTTGAGCCTTTGTGTTTTGCATATTAGTTCTTTTGTAATAAAATCTCAAAAGTAATAACTGGCAGTG

Function

GO:

id name namespace
GO:0016071 mRNA metabolic process biological_process
GO:0000375 RNA splicing, via transesterification reactions biological_process
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile biological_process
GO:0006397 mRNA processing biological_process
GO:0000398 mRNA splicing, via spliceosome biological_process
GO:0016607 nuclear speck cellular_component
GO:0005681 spliceosomal complex cellular_component
GO:0005685 U1 snRNP cellular_component

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU47105 False 105 TUCP 0.41 1 3734098 3734202
TU47106 False 105 lncRNA 0.40 1 3734098 3734202
TU47107 False 105 TUCP 0.41 1 3734098 3734202
TU47109 False 265 TUCP 0.43 2 3729230 3734202
TU47110 True 105 TUCP 0.40 1 3734098 3734202

Expression


Co-expression Network