fam159a (fam159a,LOC106598084)


Basic Information

Item Value
gene id fam159a
gene name fam159a,LOC106598084
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 2931763 ~ 2936532 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007250646.2
CTCTGGTTCTCAGTAAGAAGTTCGTTGGTGAAAGTAATCATTAGAATAACGCGATTAAACCCTGAATAAAGATCAGAACCGGATTAATAAAGTGAGTGTGAACTCCGGCGGCGGATCAGGGGCGGCTGTGAGGGAGATGAACCGCCGGGAGAGGCGGGTCTGTCCGGTAGGATGAGCGCGGTGTGCTCGGGTTATTACACCCCGGAGAAAGCGTTCGTCCGCGGCTTCACCTGCCCGAAACCCGGCGGGGACCAGCGGGCCGCCTTCTGCTGCGGATTTAACGATATTAAATACTGCTGCGACGATcccaacagcttcttcccctaCGAGTATGGATACATGTGGTGGCTAAGtgttGGGGCTCTGGTGGGTCTCTCGATTGCTGCGGTGGTCCTGCTGGCGTTCCTCGTGACGGTGTGTGTTCTCTGCTACCTCTTCATCGCCACCAAACCCAGCCGGCTGGACAGCGGCCTTCCCCTCAGTGCTCCCGGACCAGAACCAAGTCCTGAGCCCAGCCATGCCAGTGGACCTCAGGGTTTCCGCCGACACTTTCCCAACAGAAAACTGGACTGTGCCAATCAACCGGCCGAGCCTGAGCGCCTCTTCCAGCGCTGCTTCCTGGCCACCGTCGGCCGGGTGAACGCTGAAGGTCCTACATAGGAGATCTTTCTTTCTTGCTGTTCCTCAGGAAGCTTCTGGAGATTTTAAAGGATGTCTAGCAGGATGACCAACCGTGAAACATCAGAAAGGACTGAGATACAGAGTGAGATGATTAAGGGTTTCCAAAGTGATTCCAAAGATGTGTGGATAATTGGTCACCAAAATACCAGAAGGTCAATGGAAGCAGACGGTGGTTGATGCACTATCGGCTTTAAAGCTTTTGAGAAAAGACACTCATCAGGTTCCCTGTTATTTTTAGCAGGATGTGTCCTGCCTTTGTGGCCTTCGAGCCAAAAATGAGTCATGCTCTGCAGAGCCTGCTCACACAGGTAGAATCCTACACCTTCTTTAAGAAGAAGTTAATTCTAAACTGAAACTGTGGTACTAGGAACCAACATCAGCTGACATGGagtttttgaatatttttttgtctttgggATGAACGATAAACAGACTGAACAAGGATTTGGTCTAAAATTTGATGTGGTTTAGTGTGGGATTTATCCAAACTCATCATTGAacctaccaccaccatgtgtcTACTGaggtttaaatataattataataataattataaagagAAGTGGCAAATCTGAACATGTATATCTTCATTGGTTTTGAgtattttgcttaaaaaacaattgtgaacccacaaaaaacattaaaccaatTATTCATAACCATTtaccccccatcact

Function

NR:

description
PREDICTED: membrane protein FAM159A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007250646.2 True 1359 mRNA 0.48 3 2931763 2936532

Neighbor

gene id symbol gene type direction distance location
LOC103047584 NA coding downstream 4142 2923160 ~ 2927621 (-)
LOC103046677 lrp8,LOC107671705,LOC107719273,LOC107681710,LOC107559340 coding downstream 49900 2767191 ~ 2881863 (-)
LOC103044426 LOC108430742 coding downstream 190038 2734466 ~ 2741725 (-)
LOC103046368 LOC107719261,LOC107593886,LOC107671769,LOC108267486,LOC107559363,LOC106568718 coding downstream 200047 2717466 ~ 2731716 (-)
LOC103045751 leprot,LOC108430744 coding downstream 244120 2683660 ~ 2687643 (-)
scp2 scp2,scp2a coding upstream 46454 2982986 ~ 2996307 (-)
c16h1orf123 si:ch211-284b7.3,c7h1orf123,cunh1orf123,LOC103022465,LOC107681739,LOC107719286,LOC107671679,LOC107722617 coding upstream 60022 2996554 ~ 3000039 (-)
LOC103022773 uck2b,LOC108430692,LOC107593786,LOC103363741,LOC108267616 coding upstream 63589 3000121 ~ 3006666 (-)
LOC103023383 LOC108430736,LOC108267617 coding upstream 88710 3025242 ~ 3029094 (-)
LOC103023705 LOC103023705,LOC108430734,LOC105891340,LOC108267618,LOC107577377,LOC107560788 coding upstream 93200 3029732 ~ 3034068 (-)
G138446 NA non-coding downstream 75945 2768999 ~ 2855818 (-)
G138452 NA non-coding downstream 82561 2847558 ~ 2849202 (-)
G138450 NA non-coding downstream 142654 2788375 ~ 2789109 (-)
G138445 NA non-coding downstream 164648 2766207 ~ 2767115 (-)
G138414 NA non-coding downstream 183036 2680044 ~ 2748727 (-)
G138493 aldh9a1,LOC108267615,LOC108430735,LOC107681718,LOC107593789,LOC105891333 non-coding upstream 85583 3022115 ~ 3023372 (-)
G138515 txndc12,LOC107690994,LOC107566463,LOC107708672 non-coding upstream 214389 3150921 ~ 3156055 (-)
G138563 cope,LOC107690966,LOC107709006 non-coding upstream 258061 3194593 ~ 3200110 (-)
G138650 miga1,LOC107708777,LOC107722319 non-coding upstream 604439 3540971 ~ 3568654 (-)
G138651 LOC103030773,LOC108437505,LOC108267627,LOC107558181 non-coding upstream 648652 3585184 ~ 3598597 (-)
LOC103042176 zgc:55943,c7h1orf21,LOC103042176,LOC108430752,LOC107709356,LOC107671715,LOC107559369,LOC107593773,LOC107727521 other downstream 444869 2477695 ~ 2486894 (-)
G138199 plk3,LOC107563563,LOC107722069,LOC107658359,LOC107726922,LOC107557223 other downstream 1830270 1050532 ~ 1101493 (-)
LOC111194217 pappa2,LOC107722077,LOC107678935,LOC107726923,LOC107658303,LOC107558342 other downstream 2214440 695903 ~ 717323 (-)
LOC103045355 LOC108430731 other upstream 113868 3050400 ~ 3062759 (-)
LOC103025790 NA other upstream 159069 3095601 ~ 3114686 (-)
gipc2 gipc2,dnajb4,LOC108430720 other upstream 220218 3156750 ~ 3175353 (-)
G138708 NA other upstream 896189 3832721 ~ 3833670 (-)
LOC103047802 pcolce2a,LOC108437522,LOC108268019 other upstream 911190 3847722 ~ 3861356 (-)

Expression


Co-expression Network