zzz3 (zzz3,LOC107558175,LOC104950552)


Basic Information

Item Value
gene id zzz3
gene name zzz3,LOC107558175,LOC104950552
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 3479968 ~ 3503822 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007250669.3
ctccctccctctctctcccccacacacactcatacacacacttcaGTTCAGTGGAGAAAAACATGGCAGCTGCCGACTGTGCAGCAGACGCTTTGCGGAAGTGAGgTGCCCACATTCTGCCGCAGAGGAGAGCACCACGATGAGGAGAAATCAGTAGGCACCCTCCATAGTATGGCCGCGTCCCGCTCTTCGCGCGTCACAAGATCATCAGTGGGGTTAAATGGATTGGATGAGAACTTTTGTGGCCGAACCCTCAGGAACCGTAGCATCGCCCAGCCGGAGGAGACATCGCCGCCTCCCAGAGCTCGATCGCCCAAAAAGAAGCAGGACaaccagcagcaccagcaggccGGGACTAACTCGGGAAAGGTAGCCGACGGGAAGCCGGAGGGCGAACCTGCAACTGGCCACAGAAAACGAGGCCTATCCGTCTCTGAGAAAGAAGAGCCAGAGAGGTCGGAAGGCTCGGAGAGAGGTCGGGCAGGAGGAGGCCAAGAAACCTCCCCTGTCCTGAAGAGAGCCAAGCGCTGCTCTCGCTCAGAATCCCAGGGAACCGAGGAGGAACATTCTCCAAAATCAGAAAGCCCTGAACCTGCTGCAGCCAAGGAGAACGATGAGGACTCAAAATTGGACACATCATCAGCTTCTCCATCTCTCGGTCTTGAGAAAGACCCAGAGGAGAAAAAGGACAAGTCTGAATCATTGGAGGAGAGCACCTCTCCCTCACAGGCAGATGAGTCCCACAAGGCGACCAATGGCCTGGCGGAGCTCCATAAGGAGCTGCTTAAGGAGGACTTAGAACCTGCAGCCTTGACTGAAGAGCCTTGTGCCTCCCCCACCACACAGACACTCACAAACAGTCCCTCGCTGCCCAACGGCAGCCAGGCAGCTCCCTCGACCCCTGACCCCATTGTGCCTTGTAAATCCCCGCTAATTCAGCAGGTTGACGAGTCAGACGGCCCCAAGCTTGACGGCGAAAGGAACTGCTCAGCGGAGGAAGCAGCTGCAGCCGTGCTGTCTCTGGACCCAGAAGTTGAGGTCGAGGTGGATGTAGATGTGGTGGGGGATTCCATTCAGGCCCAGGACGAGCGCACGGTCGAGGAAAACGCCAATGGCTGCACACCGGTGGAACCGCAAGACCCTTCAGACGACTGCTCAAATATCTCAGGAGAAACGACAGGCTTGGCCTCCTTCAGGCTACCGGCAGAACCTCCCTCCTTCACGGAGCCTCAAGAACACAGATACACCTTGCGGACTCCGCCTCTTGATGGATGCGCTCAATCCAGCAAGCCTGactcctcacacacagacaATGGCTTACctaaagaggaggaggaggtggaggaggaggaagtgGAGGCCACAACAGTTCCTCTGAACTCTGATGAGGCCTGTCACAAAGAACCTCCAGTCGATGGACCAAGTCTCACGGTTGAGGCTGACAGTGAAGTTTCTGAGCAGGTAGAGGCCAAGGCTAGTGAAGAGGCTGCTGTGTTGGATGGTAGAATGTCCAGATCCACCAAAGAACCATCAGTCAGCCTGactgaggatgaggaggaggatcCTGATGTCTACTATTTCGAGTCTGATCACTTGGCGCTCAAACACAACAAAGATTATCAGAGACTACTCCAAACCATCGGTGTGCTGGAGGCCCAGCGAACCCAAGCCATCCTGGACCTGGAGACGTTGGCCTTCCACCAGAAGCAGGCCCTGACTGACCCCATCTCCTTTGTGGACCAGCTTCAGAAACGGGTTGAGTTGGGTTTGCCGTGTCCTCAGAGAGTGGTCCAGCTCCCTGAAATCGCGTGGGACCAATACACCTCAGGCCGCAGTGAATTTGAAAGGGAGTTCTGACAAAAGCGCAAAACAAGGCGGTTAAAATTGATCTTTGACAAAGTGGGGTTACCGGCAAGACCAAAAAGTCCAGTGGATTCCAAGAAGGAGAGTGACAGTTCTACTCTCTACTCCTCTTTGCCTTCTAGCGACGCTCCAGAACACAGCATGGCCAGCaacagaacacagATGATCCGAGGGCGACCGTATCACCAGAGCAAGCCAGACACTTTCAACCAGCTGTGGACGGTGGAGGAACAGAAAAAGCTGGAGCAGCTGCTTCTGAAGTTTCCACCTGAGGAGGTGGAGTCGAAACGCTGGCAGAAGATTGCAGATGAACTGGGGAACAGGACGGCCAAACAGGTGGCCAGCCGAGTGCAGAAGTATTTTATCAAACTGACAAAGGCTGGAATTCCAGTACCGGGAAGAACTCCGAACCTGTGCATGTACAGCAAAAAGGCGTCCGGGAAGAGACACCACCACCTCAACAAGCACCTGTACAGACCATCCACCTTCCTCACCTCCTACGAGCCGCCGGTCTACATGGACGACGAGGACGACCGCCCCGGCTTCTTCAGCAGCCTGCAGGATAACGCTGCAGATGACTCGGATGAGGACAGCGTGCCGGTGGAGTTGAGGCACTTGCCGGAGTacaaagaactgcaggagctGAAAAGACTCAGGAAGCAGAAGATCCAGGAGATCCACAGTGAAAGTGCTCTAGCCCAACACATGGGCTACAAGtgcgATGCGTGTGGCATGGAGCCGATCCAGGGTGTGCGGTGGCACTGCCAGGATTGCCCGCAGGACAACGCCGTAGACTTCTGTGGAAACTGCTCCGACTGTTTGTTCAAGACGGAGACCCACAAGCCCAGCCACCGTCTGGAGCCGGTGTACCAGGCCGAGACCTTCCTGGACAGAGACTACTGCCTGCCGCCCAGCGCAGGCTACAACTACCTGGACCCCAACTACTTCCCGGCCAACAGATGACACGAGCGCGGTGGGCCGCAGCCCCCGGGGTATTCCACGCATGGCTCATCCACCCGAGAGGCAGAACCGCTTACAGCAGGAGGAGGGATCCGCAGACCAGACCGCACCTCCACCCAAACAATCAACCGCTCGCACCACGGCCGCCACACCCTGAACCGGCCTCCTCCAGTTAAAACGCCACGGTGAAGAAGTGAAGATGCTGAGACAGGAAAAGAGAAGAAGCATCTCTGACCCAAACCCCCTCCAACGTCCAGAGGGTCTTGGTAGGAGAGAGCGAGAACGAGACGGAGAGCGTGTTTAGAAATTGATTTGAGCTGAAAGAGCAGTGGAATCTCAGACTGTTGGCAGATCAGAAGTGTTCAGAAGGTCAACGCTGAGAAGGTGTGAAGGTGTTTCTGTAGTGTGCTCTTTCTAAGTGTGAAGCTTTTCCATGTTTGGGCTGGACAGGGAGGGTCTCAGTGCTGAAGCCGCTGTCTTTCCGATTCATGTCAGGTTTTTAACCAGTTGAGGGGGATTTGCTAATAACTCGGACGTTCTTAACggtaagaaaaaagaaaaacttaagtCGACGTATCCAGAGAACACGTCTCACACAGTGGGCTACCACTTTTACTAGaagctgcttgatttttttttttctttatcccaCCCAACTCTTACATCatgttactattattattatttttcctgttttttcttgtttgttttaaatgttatgaGCCCACTCCACTTAAAGCCCGCTAGGTTCTCAACTACGAAGCACTACAGCACGGACAAGACCAGCTGAGACGCACTTGCTAGGTGACTAATAGCTTATGAACGTGGGGGGAAACAAAAAGGGTGTcgtttctcatttttctttctctgtgtgtacCGTCGTCGATCATGTGGAGTATACAGATGTATGGTGAAACTAGCCAGTGGTAGGTGCTGtgccatctttctttctttctttccttccttcctttatttttattgtccAGATAATTCCACGTCTGAACCTTGGCCACGTTTTAGAAGAAGaactttatagaaaaaaaaagtgaaaagagcTTGTGGCACTTTTTGCTCTCGATGAAGCAACGACCCGATCATCATGCCCTTCGATCTgtgtaattctttattttttattttatttttcagttttgcaGTTTCCTTGTGGTCCACgacaaaatttgtatttttattattctatttaaaCAGCAGTGATGCCGAGGAAAAGAAGATATCAAGGTGGCGGCTGCCACCCAAAGTGGTACACCCACGTTATTTTATACACATAGATTTTGTTGTGCTTCAAGTAGACCATTTTTGTATGGATTCTGTTTCGTTCACACACCCCAGACTCACCCTTTGCCCCGCTTCAATATCAGTGTATAAAAGTCTGttcttaaataatgttaaaaatgttagaGGAGAACTGTGGaaataaaagtatgtgaaaAGTCTTTCTA

Function

symbol description
zzz3 Predicted to enable zinc ion binding activity. Predicted to be involved in histone H4 acetylation. Predicted to be part of Ada2/Gcn5/Ada3 transcription activator complex. Orthologous to human ZZZ3 (zinc finger ZZ-type containing 3).

NR:

description
PREDICTED: ZZ-type zinc finger-containing protein 3 isoform X1

GO:

id name namespace
GO:0005488 binding molecular_function

KEGG:

id description
K24536 ZZZ3; ZZ-type zinc finger-containing protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007250669.3 True 4280 mRNA 0.52 14 3479968 3503822

Neighbor

gene id symbol gene type direction distance location
pigk pigk,LOC107751867,LOC107599845 coding downstream 63659 3381575 ~ 3416309 (-)
dnajb4 dnajb4,LOC108430719,LOC107599850,LOC107751861,LOC107681825,LOC107690981,LOC107566472 coding downstream 295433 3177666 ~ 3184535 (-)
LOC107197653 NA coding downstream 329091 3119979 ~ 3150877 (-)
LOC103025183 ppm1la,ppm1l,LOC108430727,LOC107722109,LOC107681725,LOC107701333 coding downstream 380078 3089391 ~ 3099890 (-)
LOC111194268 LOC108430728 coding downstream 393493 3084742 ~ 3086475 (-)
usp33 usp33,LOC107708728,LOC107751869 coding upstream 754 3504576 ~ 3535405 (-)
LOC103031087 dia1a,LOC108437525,LOC107681802,LOC107599840,LOC107722302,LOC107565821,LOC108268022 coding upstream 218915 3722737 ~ 3759982 (-)
LOC103031615 NA coding upstream 289506 3793328 ~ 3796794 (-)
LOC103032259 si:ch211-38m6.6,LOC108437504,LOC107656858,LOC107722537,LOC107565819,LOC107681768,LOC108267997,LOC107599859 coding upstream 470988 3974810 ~ 3990263 (-)
LOC103021848 LOC103021848,LOC108437503 coding upstream 499003 4002825 ~ 4016139 (-)
G138563 cope,LOC107690966,LOC107709006 non-coding downstream 279858 3194593 ~ 3200110 (-)
G138515 txndc12,LOC107690994,LOC107566463,LOC107708672 non-coding downstream 323913 3150921 ~ 3156055 (-)
G138493 aldh9a1,LOC108267615,LOC108430735,LOC107681718,LOC107593789,LOC105891333 non-coding downstream 456596 3022115 ~ 3023372 (-)
G138452 NA non-coding downstream 630766 2847558 ~ 2849202 (-)
G138450 NA non-coding downstream 690859 2788375 ~ 2789109 (-)
G138650 miga1,LOC107708777,LOC107722319 non-coding upstream 37149 3540971 ~ 3568654 (-)
G138651 LOC103030773,LOC108437505,LOC108267627,LOC107558181 non-coding upstream 81362 3585184 ~ 3598597 (-)
G138657 NA non-coding upstream 95441 3599263 ~ 3599510 (-)
G138659 NA non-coding upstream 111971 3615793 ~ 3616014 (-)
G138662 NA non-coding upstream 159954 3663776 ~ 3664008 (-)
gipc2 gipc2,dnajb4,LOC108430720 other downstream 304615 3156750 ~ 3175353 (-)
LOC103025790 NA other downstream 365282 3095601 ~ 3114686 (-)
LOC103045355 LOC108430731 other downstream 417209 3050400 ~ 3062759 (-)
LOC103042176 zgc:55943,c7h1orf21,LOC103042176,LOC108430752,LOC107709356,LOC107671715,LOC107559369,LOC107593773,LOC107727521 other downstream 993074 2477695 ~ 2486894 (-)
G138199 plk3,LOC107563563,LOC107722069,LOC107658359,LOC107726922,LOC107557223 other downstream 2378475 1050532 ~ 1101493 (-)
G138708 NA other upstream 328899 3832721 ~ 3833670 (-)
LOC103047802 pcolce2a,LOC108437522,LOC108268019 other upstream 343900 3847722 ~ 3861356 (-)
LOC103034146 zgc:110366,LOC108267892,LOC108437513,LOC105007548 other upstream 827049 4330871 ~ 4338197 (-)
G139074 NA other upstream 1772284 5276106 ~ 5276468 (-)
G139105 NA other upstream 1826256 5330078 ~ 5330805 (-)

Expression


Co-expression Network