zbtb41 (zbtb41,LOC102777630)


Basic Information

Item Value
gene id zbtb41
gene name zbtb41,LOC102777630
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 1709324 ~ 1717429 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022677684.1
atgaacCTCCTAGCTGGGGAGGCGGAGCCGCCGCCGGCTGCTGGGCAGCAGGAGAATGAGGAGGGAGgagatgataatgatgatgatgaggaggaggaggaagatgaggaggagaaggaACCTGAAACACCTCGTCTTAAAGAAAGTGTTCAGAAGCCTCAAGCAGAAACTCGATGCTCGTTATGCGGCCGGACGTTCCGCTATAAGAAGTTTCTTGATAATCACGTGGCAAAGATGCACAGCAAGAGCATTCACGCTGTGGAGGAAGAAGAacgagaagaggaagaagataaagaagaagaatcGGTCAGCAGAAGGATGGTTCCTGTAGTCGGCACCCGCAAATCATCACGAAGTAGAAATACAAGATTTAAGAAGCAGGAGACAGGAAATGGGAGCCATGGAAGTGAGCGCAACATCCAAACAGACGTGAACACAGATAAAgatcaagaagaagaagaagaagacgaagatgAGCAGCAAAGACATGAAGGACACGCAGCCCAGACAGAAACCTTCATTatggaggaggagcaggaggaggaagtggTGGACGTGAGGCTTGAAGAGCACAGGAAGGCCAGTAAAGCAGATGGTGATAGTGAAGCTGTTGCGCCACCTTCAGGTCCAGAGACTGAACTGAGCTTTGCAGGTGTGTCTAAAGCACCAGGTCCAGCAGAGCAGGTGAAAAGCCATGTTTATCCAGAGGGACTGGCGCCAGTTATCATCCAGAGCTCCAGCAAAAAGACCCTCAAATGCCCCAAGTGTGACAAGACGTTCGATCGAATAGCAAAATACCAGATTCACACCAGAGTGCACACGGGAGAAAAGCCTTTCCAGTGTGAAATCTGCCTGCAGCGTTACTCCACCAATTCCAACCTCACTGTTCACAAGAAGAAACACGCTAGTGACGCTCCTGTGGTGAAAAAAGACCACAAGTGCCCTTTCTGCAGCAAACTTCACGCTAGCAAGAAGACTCTAAACAAACACGTCAAAAGGTTCCACCCTGACTGCGTCCAGGAGTTTTTAAGCgcgaggaagaggaagagtgaagGGTGGAAGTGTGATATCTGCCACAAGTCTTTCACTCGTCGGCCTCACCTGGAGGAGCACATGATCCTGCACACTCAGGACAGGCCTTTTAAATGTGCGTACTGCGACGACTACTTCAAATCACGCTTCGCTCGATTAAAACACCAGGAAAAGTTTCATCTGgGACCTTTCCCGTGTGATATCTGTGGAAGGCAGTTTAACGACACGGGCAATCGAAAGAGGCACATCGAGTGCACCCACGGAGGAAAGAGGAAGTGGACCTGCTACCTCTGCGGCAAATCTGTCAGAGAGAGAACCACACTCAGAGAGCACCTGAGGATCCACAGCGGGGAGAAGCCTCACCTCTGCAGCATCTGTGGACAGAGTTTCCGCCACGGCAGCTCCTACAGGCTGCATCTCCGTGTTCACCATGATGATAAGCGATATGAGTGTGAGGAATGTGGAAAAACATTTATTCGACATGATCATCTGAAGAAACACAGGAAGATCCACACAGgAGAGAGAGCGCACCAGTGTGAGGAGTGTGGGAAGTGTTTCAGACGTGCCGATCACCTGGCTGTCCATTACAAAAGCATTCACCTGGGAGAGAAAGTCTGGCGAAAGTACAAGGCTGTTGTGCACCAGTGTGAAGTGTGTAAGAAGGAGTTCAGAGGGAAGACCAACCTCATGACACATTTCAGAACACATTCAGGAGAGAAGCCCCACCGCTGCGTCATCTGCAACCAGACCTTCCGAATTAAGAAAACTCTTACGAAGCACATGGTCATCCACTCGGACGTGCGTCCCTTCAACTGTCCGCACTGCAGCGCCACCTTCAAACGCAAGGACAAGCTAAAATACCACGTAGACCACGTGCACAGTGGACGCCCTGTGAGTCagtccccgtccagtctctccACCGCCTCCAACGACAAGCTGACGGGGCCCCTGACGGCCCCCGAAACGGCCAAAGCGTACAAGAGCGTCCTGCAGGGGGACGTGTGTGTCCCCGTCACTCTGGTGCCCGTCCAGCTGCCCGAGGAGCCTGAACTGCCCCACGTCCAGGTCCAGCAGGTCCAGCAAGTCCAGCAGGTCCAGCAGCCAGGCAGCTACCAGCCAGCCACGGACCTGGTGTTCCTGGAGAAGTACACGCTCACGCCCCAGCCGGCCAACATCGTGCACCCGGTGCGACCAGACCAAATGCTGGACCCCCGGGACCAGTCGTACCTCGGGACCTTGCTGGGCCTTGACACGGCAACCACCGTCCAGAGCATGGCTGCTTCTGAGCATGCTCAGTAGCACTTCGGATAAATGAACAGATTAATTCATCAGTGTTGCCACTCTATTTTATGCTGCTCTGCAatatgctctctctttttcagttattattacattatatttacattattacaacATAAGGATGTGTTTTTAAGCTGCAgtatgtattttacagtatagATTTGATGGACCGCTTCAGTCAAACTTCCACCCTGGGAAAATGGAAATGTGAATGAAatgatgtgaaaaatgcattaaatctaAATGCATAACCTGTTTAAAAAA

Function

symbol description
zbtb41 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Orthologous to human ZBTB41 (zinc finger and BTB domain containing 41).

NR:

description
coagulation factor XIII B chain-like isoform X1

GO: NA

KEGG:

id description
K10513 ZBTB41; zinc finger and BTB domain-containing protein 41

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022677684.1 True 2595 mRNA 0.51 10 1709324 1717429

Neighbor

gene id symbol gene type direction distance location
LOC103022462 NA coding downstream 3956 1702574 ~ 1705368 (-)
LOC103045138 NA coding downstream 8654 1695745 ~ 1700670 (-)
LOC103023075 kcnt2 coding downstream 28001 1652474 ~ 1681323 (-)
LOC111194258 NA coding downstream 162325 1539103 ~ 1546999 (-)
dcaf8 dcaf8,LOC107706361,LOC107659382,LOC107738146 coding downstream 185639 1510633 ~ 1523685 (-)
LOC111194260 NA coding upstream 31429 1748858 ~ 1757008 (-)
LOC103044322 pfn2,pfn2l,LOC107681776 coding upstream 44680 1762109 ~ 1770217 (-)
fyttd1 LOC107709339 coding upstream 87408 1804837 ~ 1809651 (-)
LOC103043415 LOC108430767 coding upstream 105797 1823226 ~ 1830971 (-)
LOC103041568 LOC108430764,LOC107671734,LOC107559383,LOC107711714 coding upstream 206251 1923680 ~ 1965329 (-)
G138290 NA non-coding downstream 17009 1638155 ~ 1692315 (-)
G138289 NA non-coding downstream 18372 1688785 ~ 1690952 (-)
LOC111194191 NA non-coding downstream 59782 1648750 ~ 1649542 (-)
LOC111194190 NA non-coding downstream 62487 1646080 ~ 1646837 (-)
G138273 NA non-coding downstream 115282 1593418 ~ 1594042 (-)
G138299 NA non-coding upstream 4221 1721650 ~ 1722178 (-)
G138322 LOC103043726,LOC105899208 non-coding upstream 93609 1811038 ~ 1817138 (-)
G138323 NA non-coding upstream 109673 1827102 ~ 1836713 (-)
G138315 NA non-coding upstream 110967 1828396 ~ 1880995 (-)
G138325 vps4b non-coding upstream 127900 1845329 ~ 1846510 (-)
G138199 plk3,LOC107563563,LOC107722069,LOC107658359,LOC107726922,LOC107557223 other downstream 607831 1050532 ~ 1101493 (-)
LOC111194217 pappa2,LOC107722077,LOC107678935,LOC107726923,LOC107658303,LOC107558342 other downstream 992001 695903 ~ 717323 (-)
LOC103042176 zgc:55943,c7h1orf21,LOC103042176,LOC108430752,LOC107709356,LOC107671715,LOC107559369,LOC107593773,LOC107727521 other upstream 760266 2477695 ~ 2486894 (-)
LOC103045355 LOC108430731 other upstream 1332971 3050400 ~ 3062759 (-)
LOC103025790 NA other upstream 1378172 3095601 ~ 3114686 (-)
gipc2 gipc2,dnajb4,LOC108430720 other upstream 1439321 3156750 ~ 3175353 (-)
G138708 NA other upstream 2115292 3832721 ~ 3833670 (-)

Expression


Co-expression Network