pappa2


Basic Information

Item Value
gene id pappa2
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 718023 ~ 750580 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022677741.1
GTTATAAGCGGGGTCTGGCCCAGCGTGCGGACCGGTCCCAGGCCGCTTTGGGACAGGAGCAGTGCGGTTCTATGAGCCGGAGGCGACTGGCCAGGTCCGCGGCTCAACACCACCAACTAGCGGCTTTGACTGGTCGGTACAGCCGGCTGTCGGAGCTTCATTACAGGATAGCAAGGTCCTCCTGCTCGGGAGGATGCAACCTGGACGGGATGCATGATGGACCTTCATGGGAGAGCCAAAAAGGGTTGCAAAAAAGACCCTATAAATCAGATCATAAagctgatggatggatgatgggtgCATGGAGATCCCGCTTGAAACGCAAAAGGAATAAAAGTCCGGACTCTGCTGACCCCAACTCTTCTACCACTAAATCTTACACCGTGTCCAGAGGACTGAGCAGAGTTTGGAATGGTAAAACATTAGACAGTAGAGTTCACAGGTTGTCCCAACTGAGGGAAGCAAGAGGCGTTGGAGTGGACAGCTTCCCTTCAGCGAAAAGAGTTCCTCGAAGTCCAGCAGAAATCCACAGTGACTCAAAGGTGCATCCAGGTGACCCTGAGTTGGAGAATGATGTTCGCAGCTCTGAGGGGGGCTCGGACTACTCAGGCGAACAGGAGGGCCAAGCTGGTCAAGGAGCAGCAGAGCGATGGGGGGCAGTGGTCCAGGACCTTCCTCTTAAGTGGATGACAGCCCTCTACTTCAGCGGCCAAAAGGAGCAGCTGAGGGTGAACCCCGTGGCCGACGTGGAGCTCCCACGCTCCAGGTTCACCTTGGAGCTGTGGGTCAAGCTAGAAGGAGGTCAGAACAATCCGGCCATCATAGCAGGTGTGTTTGACAACTGCTCCCACGCCCACAACGAGAGAGGGTGGTCTGTCGGGATCAGGACGCTGAAACCCGGCGGCAGAAAAGACGCCAGGTTCTTCTTCACCCTCCGCACAGACCGCGCCCTCAAATCCACCACGCTCGTCGGGCACCAGCACTACCAACCCAGCGTCTGGACTCACGTGGTGGCCTGGTACGATGGCCACCGGATGGCGCTGTTTATAGATGGCTCAAAGGTTGCCGAGAGCAGACAGCAGTCTGGGGACATTTACAGCCCCTTTATAAAGAGTTGCCGCATGCTCCTTCTGGGAGGGGACCAGTCCAGCACAGGCCATGGGTTTAGAGGATATCTAGGTGGTGTAGTTCTGTGGAATCATGCCCACCCTCAGGACCTGCTGTCGAAGCTCTTCAAGAGCTTCACCAAACACTCTTTTGAGCATGAGCCCCCCCTCCTGGTCCTGTGGGCCGACTTCTCTGAGGTGGAGCAGCAATGGATGCCGTACAAATCTCGCCACCATCCAACCGTCGTGGCCTTGCCGGCACCGGAACAGGCGCTGGTGTCACCGTTCCTGCCTCCACCATGTGGGGTGACTATCTGTGACAATCCCGATGTCATCTTAAGCTACAGCCAACACTGGCAGCTGCGTGCCAGCAAGCGACTGCGCTACCGCGTGGTGAACGTCTGCGCCGATGACGGCAGCCGCCCCACCGTCtcgcagcagcagatccagcagcagcaccaggCTCTGGAGGAGGCATTCCGGCCGTACAACCTGACGCTGGAGCTCAGCGTGCTCAACGTACGCAACTCCTCGCTGCAGGGACGCTTCATTCTCAGTAACTGCCACGTCGCCAAGGTGGGCAACAGGCACTGCGACCGCGAGTGCGACCACCCGCTGACTGGACATGACGGCGGGGACTGCCTGCGTCTAGGAACCTGCTACAACTGGATGAGGGGCGACGGCGTCTGCAACCCGGAGTGCAATGGTATCCATTACGACTACGACGATGGAGACTGTTGCGATCCACAGATCACCGACGTGGCGAGGACCTGCTTTGACCCGGAATCTCCTGAAAGGGCTTATCTTAGTGTGAAGGAACTGAAGGAACTGCTTCACCTGAGCAGCTCCGACACGCTCAACGTCTTCTTCGCCAACAATTCTGCATGGGAAGATCTCGCCGGCGCTGCCACCTGGCCCTGGGCCAAAGAGGCTCTCACACATCAAGgtggaatgatcCTGAACCCTTCCTATTTCGGAACTGTTGGACACAACACCATGATCCATGAGATGGGTCACATCTTCGGGCTGTACCATGTGTTTAAGGGGGTGAGTGAGAGGGAATCGTGTGATGATCCCTGCAGGGAAACTACAGCATCTATGGAAACTGGAGATCTGTGCGCCGACACGGAGCCGTCCCCAAAATCTAAAGTCTGCAGAGACCCCGACCCCGTCAACGATACCTGCGGACTCACCCAGTACCACAACACACCCTACACCAACTACATGAGCTACACAGATGATAACTGCACCAATCAGTTCACTCCACACCAGGTAGCTCGGATGCACTGCTACATCGACCTCACCTACAGCAACTGGGTTCAGAGCAAGAAACCCACCCCCGTTCCACTAGCGCCTATGATAATTGGTCAATATGAAGACTCGGTCTCTATTCATTGGCTGCATCCAGTGAGTGGACCTCTTAGACAAAGggaggAGGGGGTGAATTGCCAGTTGTGTGATGAACATGGAGTGCTTCACCAGTACGCCTTTGAGGCCACGTCTCCTCATACCTGCGATACCAGCGGGTACTGGACTCCAGAGGAAGCAGTAGgtgctCCAGATGTGTACCAGGTATGTGAGCCCAGCATGCGAACCTGGAGCCCCGAGTTCAGCCTCTATGAGGCCAATATGACCTCCCCCTGTCCCCAGACTGAGGGCTGTGTTCTCCAGCTCTACTTCCAGCACCCAGTGATCCCAGACACCATAACCATCTGGATCACCTACATCTCCACCAACAGTCAAGCCATCTCTAACCTGGAATTCATCCTGGAAACGGGCGAGTCTCTTCACGCTGGTCCTCAGCAGGTCTTCTGTGACGTTCCGCTGACTCTGAGGGTGAACACCAACAAGAAGGTGAAAGCCATCAAAATGTGCACTTTTGATAAGAAGCTGGAGATCGACGCCGCCCTGCTGACGTCTCGACCCCAGAACCCGCTGTGCTCCCGCTGCCGGCCTCTGCTGTACCGCGTCCTGAGAGAACCCGCCATCAGGGAGGGCTGGAGTCCTGTCATCCTCAAACAGAACACATACACGGACAGTGATGTTGGGCGAGGAGAGAGGTATGAGTACAGGATTCAGGTGGAGGTGGACGGTGTGCTGAGTGAACTTTCTCCACCGCTGGTCTACACCCACGGAGAGCATTACTGTGGAGACGGCCAGCAGCAGGGGAACGAGGAATGTGACGACGGGAATCTGCTGGATGGAGACGGCTGCTCCAAAAAATGCCGCATTGAGCCGGGCTTCAACTGTGCAGGTCGGCCGAGTCGATGTTATATATTCGAGGGTgatggagtgtgtgaggagtttGAGAGAGGATCCAGTGTAAGAGACTGTGGGTTCTTCACCCCTGAGGGTTTCATTGACCAATGGGCTTCCAGCGCCACGGCCTCCCATCAGGACCAGCACTGCTCTGCTCTCGCTGCTACAGGGATGCCTGATCTCAGTCAGaTGTGCAGGTCTCAGTACGTAGAGATGAACGATGCTCTGAGCCGGGAGGCGTGGGTCCCTTACTCCGCCCAACtcaacccccacccccaccacgAGCACGGCCAGCCGGCGTGGCTGAGGGTGGAGTTTGAAAGACCTGGAATAGCAGCTTCAGTCCTCATTTACCTGGCGTACGACGGGGGAATGCACGGAGAAAACTGCAGGAAACagtccatatacagctctgtgacACCAACGGCCTCAACCACACACTcgGTACCTACGAGCTGTCGTGTCAGCGTAACCCCCTGGTGGTGAACGTCACTCACAACCTGAGTTTACCATTTTACCAAACGGCCGCGGTTCTGCTGAACTTCTCCACGGTTCACGTGGCGGTGCTGGGGGT

Function

NR:

description
PREDICTED: pappalysin-2 isoform X1

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022677741.1 True 3939 mRNA 0.56 14 718023 750580

Neighbor

gene id symbol gene type direction distance location
brinp2 brinp2,LOC107720848,LOC107658350,LOC107700985,LOC107562711,LOC107722070 coding downstream 294235 286350 ~ 423788 (-)
cenpl cenpl coding downstream 541357 173241 ~ 176666 (-)
eif2b3 eif2b3,ei2bg,LOC107720854,LOC107700990,LOC107722074,LOC107599900 coding downstream 571818 127085 ~ 146205 (-)
LOC103021456 ptch2,LOC107557169,LOC107700991,LOC107720855,LOC107599897,LOC107722076 coding downstream 594351 95083 ~ 123672 (-)
LOC111194215 NA coding downstream 628493 88370 ~ 89530 (-)
tnn NA coding upstream 241313 991893 ~ 1026466 (-)
trove2 trove2 coding upstream 339657 1090237 ~ 1102807 (-)
shh shh,LOC108411758 coding upstream 594484 1345064 ~ 1360413 (-)
lmbr1 lmbr1,LOC107742132,LOC106578611 coding upstream 704873 1455453 ~ 1487674 (-)
LOC111194257 LOC108430781,LOC108267757,LOC107591375 coding upstream 741236 1491816 ~ 1497588 (-)
G138136 NA non-coding downstream 211585 485697 ~ 506438 (-)
G137721 NA non-coding downstream 291495 426235 ~ 426528 (-)
G137719 NA non-coding downstream 297624 418761 ~ 420399 (-)
G137710 NA non-coding downstream 331666 281116 ~ 386357 (-)
G137659 NA non-coding downstream 524025 193354 ~ 193998 (-)
G138160 rfwd2,LOC107658354,LOC107726924 non-coding upstream 25039 775619 ~ 780533 (-)
G138166 NA non-coding upstream 107368 857948 ~ 864771 (-)
G138195 NA non-coding upstream 287287 1037867 ~ 1039082 (-)
G138196 cacybp non-coding upstream 290953 1041533 ~ 1044679 (-)
G138198 NA non-coding upstream 295716 1046296 ~ 1047398 (-)
LOC111194217 pappa2,LOC107722077,LOC107678935,LOC107726923,LOC107658303,LOC107558342 other downstream 700 695903 ~ 717323 (-)
G138199 plk3,LOC107563563,LOC107722069,LOC107658359,LOC107726922,LOC107557223 other upstream 299952 1050532 ~ 1101493 (-)
LOC103042176 zgc:55943,c7h1orf21,LOC103042176,LOC108430752,LOC107709356,LOC107671715,LOC107559369,LOC107593773,LOC107727521 other upstream 1727115 2477695 ~ 2486894 (-)
LOC103045355 LOC108430731 other upstream 2299820 3050400 ~ 3062759 (-)
LOC103025790 NA other upstream 2345021 3095601 ~ 3114686 (-)
gipc2 gipc2,dnajb4,LOC108430720 other upstream 2406170 3156750 ~ 3175353 (-)

Expression


Co-expression Network