LOC103024348


Basic Information

Item Value
gene id LOC103024348
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 4243466 ~ 4245836 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022677857.1
ttttttgctGGAAGCACAGAGAAAAATGTGGGGTTCTATTGTATTTGTGGTTCTTTGGTTGAATTCTGTGAGCAATGCAGCTGTAGCTCGTTGGAGTCCTCGAGCTCTATCAGAGGAACAACCTCAAACCCCACAGTTTTCTGGGCTGCCATCTGGGTCTCTGGTTCCCCAGCTTTCTGGGCCACTTCTTTTTCAGCCATCTTGGCAACTTCCCTCTCAACCTTCTGGGCCTCTGGCTCCCCAACCTTCCGggccacttttttcccagcctttaccggccacttttttcccagccttccGGGCCACTTTTCCCAGCCTCCGGGCCAGACtttttttcccagccttccgggccacttttttcccagccttccgggccacttttttcccagccttccgggccacttttttcccagccttccgggccacttttttcccagccttcTGGGCTGTTACCACCAGGGTCTGATCCTCAGGTACAGGTAACTACTGCTGATAAATGTAATCTGGATGATTCTGACAAGATTCCCTGTGGTGAACCAGGCTTGGATGCTTCCCACTGTGGTGCTATAAACTGCTGCTTTGATGGGCAGCAGTGCTACTATGGTAAAACAgTGACTGTCCAGTGTACAGTCGATGGGCAGTTTGTTTTGGTGGTGGCCCGGAATACAACACTTCCTAGGATCAGCTTGGATTCCATCAGCCTGTTGGGAGGAAGTGATGGGCCCTGTGCTGTTGTGGACTATAATGCTGACTTTGCTATATACCAGTTTCCTGTAACTGCTTGTGGAACAAACGCAATGGTGTTTAGTGACTATGTGGTCTATGAGAACAAAATGGTGTCTTCCTATGAAGTTGGTGTGGGACCCCTTGGTTCCATCACAAGAGACAGCCACTACGAGCTTTACTTCCAGTGTAGATATTCTGCTACAAGTGTCGAGTCCCTGGCTGTTGCACTTTCTTCCAATGATCCTCCTCTACCTTTAATGGCTTCTGGCCCGCTCAGGGTAGAGCTGAGGCTTGGCAATGGTCAGTGTGTGACAAAGGGCTGTGTGGAAGAGCAAGTAGCGTATACTTCCTACTATGCTGAAAATGACTACCCTGTGACCAAGGTCCTGAGGGAGCCTGTATACGTTGAGGTGCGCATGTTGGGGCGAACTGATCCCAATCTGGTCCTGGTCTTGGGACACTGTTGGGCAACCTCTACACCTGACCGGGACAGTGTACCTCAGTGGGATCTTCTGGTGAATGGGTGCCCGAACAAGGATGATCGCTACCTGACCACCCTGGTTCCAGTTGATGGGTCATCTGGACTTCAGTACCCCAGCCATTACAAGCGCTTTGTCCTCAAGATGTTCACATTTGTGGATCGTTCTATGAACCCCTTGAAAGAGACGaTCTACATCCACTGCAGCACAGCTGTGTGCTCTCCAACTGCAGGTGCCGCTTGTGAACAAAAGTGCGATAGAAGGAGGAGAGATGTTGGATCGGTTGCCTGGAAATCGGAGCCTGAATCAGTTGTGTCTAGTGGAGAAGTGATTTACACACAAACTGCCCAGCTCCAGCAGGATTGATTGTGACTCTGTTCTCAATAAAGGGGTCTTGCTTTTGAA

Function

GO: NA

KEGG:

id description
K19926 ZP1; zona pellucida sperm-binding protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022677857.1 True 1610 mRNA 0.50 8 4243466 4245836

Neighbor

gene id symbol gene type direction distance location
LOC103023384 LOC108437496 coding downstream 17829 4181189 ~ 4225637 (-)
ripk2 ripk2,LOC107681812,LOC107715521,LOC107722215,LOC107701343 coding downstream 100848 4128532 ~ 4142618 (-)
LOC111194272 LOC108437516,LOC108267691,LOC107715522,LOC107681815,LOC105889505 coding downstream 121473 4105554 ~ 4121993 (-)
eif4a2 eif4a2,LOC108267852,LOC107568626,LOC107593804,LOC105889495 coding downstream 169188 4068778 ~ 4074278 (-)
LOC103021848 LOC103021848,LOC108437503 coding downstream 227327 4002825 ~ 4016139 (-)
LOC103024967 LOC108437498 coding upstream 35691 4281527 ~ 4289548 (-)
LOC103025293 NA coding upstream 44576 4290412 ~ 4304086 (-)
LOC111194273 NA coding upstream 103954 4349790 ~ 4360297 (-)
LOC103036275 cdc14aa,LOC108411489 coding upstream 116237 4362073 ~ 4381423 (-)
xpr1 xpr1,LOC108267842,LOC107593799,LOC107681714,LOC107722139,LOC105029208 coding upstream 151672 4397508 ~ 4432770 (-)
G138837 NA non-coding downstream 9284 4179824 ~ 4234182 (-)
G138822 NA non-coding downstream 67870 4172979 ~ 4175596 (-)
G138834 NA non-coding downstream 80986 4162212 ~ 4162480 (-)
G138830 NA non-coding downstream 92331 4141468 ~ 4151135 (-)
G138817 dcun1d1,LOC107656862,LOC107568628,LOC107722250,LOC105889496,LOC103032878,LOC107681826,LOC107578399 non-coding downstream 166000 4075500 ~ 4077466 (-)
G138910 NA non-coding upstream 86558 4332394 ~ 4351126 (-)
G138913 NA non-coding upstream 150254 4396090 ~ 4396932 (-)
G138919 NA non-coding upstream 175028 4420864 ~ 4421595 (-)
G139011 NA non-coding upstream 460377 4706213 ~ 4707525 (-)
LOC111194275 NA non-coding upstream 506737 4752573 ~ 4754327 (-)
LOC103047802 pcolce2a,LOC108437522,LOC108268019 other downstream 382110 3847722 ~ 3861356 (-)
G138708 NA other downstream 409796 3832721 ~ 3833670 (-)
gipc2 gipc2,dnajb4,LOC108430720 other downstream 1068113 3156750 ~ 3175353 (-)
LOC103025790 NA other downstream 1128780 3095601 ~ 3114686 (-)
LOC103045355 LOC108430731 other downstream 1180707 3050400 ~ 3062759 (-)
LOC103034146 zgc:110366,LOC108267892,LOC108437513,LOC105007548 other upstream 85035 4330871 ~ 4338197 (-)
G139074 NA other upstream 1030270 5276106 ~ 5276468 (-)
G139105 NA other upstream 1084242 5330078 ~ 5330805 (-)
G139489 NA other upstream 1763217 6009053 ~ 6010867 (-)
LOC111194281 NA other upstream 1776773 6022609 ~ 6054733 (-)

Expression


Co-expression Network