LOC107197483


Basic Information

Item Value
gene id LOC107197483
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172441.1
NCBI id APWO02002039.1
chromosome length 306493
location 15658 ~ 16141 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>LOC107197483
GAGTCTGATTAGTTCTCATAATGAAGATCACATTCTCCTTATTACTGCTACTGCTCACCTTCAGCAgtGTGAAATGTGAAAGTATGGAATCATTAGAAACTGCAGTTCAGATAAAACCTGGAGAAACTCTGAGTCTCTCCTGTAGAGGATCTggatttagctttgattgctgtaACATGCACTGGATCAGACAACAGGCTGGAAAACCACTGGAGTGGGTGGGATATATTTCCAACCTTGCAGGGAGCAAAGGCTATGGAGAATCATTTCAAGGCCGAACTGAAATCAGCAGAGATAATTCTAACAGCATGGTGTATCTCAAACTGTCTGGTGTGACAGCAGAGGATTCAGCTGTGTATTACTGCGCTCGACAAACACAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC107197483 True 383 V_segment 0.43 2 15658 16141

Neighbor

gene id symbol gene type direction distance location
LOC111190154 NA coding downstream 217671 233812 ~ 236578 (+)
LOC103041119 NA coding downstream 222633 238774 ~ 239350 (+)
LOC103040202 NA coding downstream 224207 240348 ~ 244545 (+)
LOC111190155 NA coding downstream 230439 246580 ~ 258409 (+)
LOC111190159 NA coding downstream 269918 286059 ~ 287629 (+)
G280290 NA non-coding downstream 6276 22417 ~ 31533 (+)
G280297 NA non-coding downstream 20230 36371 ~ 37656 (+)
G280298 NA non-coding downstream 21978 38119 ~ 39668 (+)
G280332 NA non-coding downstream 175597 191738 ~ 247699 (+)
G280334 NA non-coding downstream 191433 207574 ~ 207855 (+)
LOC111190138 NA other downstream 27683 43824 ~ 44531 (+)
LOC111190144 NA other downstream 40908 57049 ~ 57561 (+)
LOC103027076 NA other downstream 66257 82398 ~ 82963 (+)
G280315 NA other downstream 75996 92137 ~ 92613 (+)
LOC111190140 NA other downstream 79843 95984 ~ 96561 (+)

Expression


Co-expression Network