LOC111190128


Basic Information

Item Value
gene id LOC111190128
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172441.1
NCBI id APWO02002039.1
chromosome length 306493
location 175181 ~ 175779 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>LOC111190128
TTCTTCTCAGTGCAGCTTCCACCACCAACACCATGTTCTCCACACTGATCCatctactgctgctactaacaGCTGCTGCATCCTGGGTTGATTGTATAGAGCTGGATCAGCCTGCAGTCATGGTTGTTAAACCTGGAGAATCTTTCTCCATTGCCTGTAAGATCACTGGATATTCAGCTGTAGGTGGAGGCTACACTAACTGGATACGACACTCATCAGGAAAAGCTCCAGAATGGGTTGGATGGTTCTATGATTCCGAATCTAAAGGCACCAAAGATTCACTGAACAGCAAGATCAGTTTTACTGGAGAATCTTCCAgcaacacagtgtttttacaggGGCAGAACTTCCAGTCTGaggacagcgctgtgtattACTGCGCTCGAGATGCACAGTGATACAGTCTGCTGTAGAGGCTGTACAAAAACCCCCAACTTCCCTCATTCACACCATCAGTACCTCTTCTATAATAACAAGTTACTTTAAATGAGCGTTAGGGGGCAGTGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC111190128 True 508 V_segment 0.46 2 175181 175779

Neighbor

gene id symbol gene type direction distance location
LOC107197483 NA coding upstream 159040 15658 ~ 16141 (+)
LOC111190154 NA coding downstream 58033 233812 ~ 236578 (+)
LOC103041119 NA coding downstream 62995 238774 ~ 239350 (+)
LOC103040202 NA coding downstream 64569 240348 ~ 244545 (+)
LOC111190155 NA coding downstream 70801 246580 ~ 258409 (+)
LOC111190159 NA coding downstream 110280 286059 ~ 287629 (+)
G280298 NA non-coding upstream 135513 38119 ~ 39668 (+)
G280297 NA non-coding upstream 137525 36371 ~ 37656 (+)
G280290 NA non-coding upstream 143648 22417 ~ 31533 (+)
G280332 NA non-coding downstream 15959 191738 ~ 247699 (+)
G280334 NA non-coding downstream 31795 207574 ~ 207855 (+)
G280338 NA non-coding downstream 64575 240354 ~ 249052 (+)
G280345 NA non-coding downstream 76884 252663 ~ 254221 (+)
LOC111190165 NA non-coding downstream 85098 260877 ~ 261488 (+)
LOC111190145 NA other upstream 3372 171261 ~ 171809 (+)
LOC111190150 NA other upstream 9457 165242 ~ 165724 (+)
LOC103032846 NA other upstream 15133 159300 ~ 160048 (+)
LOC111190149 NA other upstream 24874 149657 ~ 150307 (+)
LOC111190136 NA other upstream 29107 145407 ~ 146074 (+)
LOC111190164 NA other downstream 1755 177534 ~ 178182 (+)
G280328 NA other downstream 4245 180024 ~ 226732 (+)
LOC111190146 NA other downstream 4249 180028 ~ 181015 (+)
LOC111190163 NA other downstream 9168 184947 ~ 185506 (+)
LOC111190151 NA other downstream 16996 192775 ~ 193266 (+)

Expression


Co-expression Network