LOC111190131


Basic Information

Item Value
gene id LOC111190131
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172441.1
NCBI id APWO02002039.1
chromosome length 306493
location 134179 ~ 134669 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>LOC111190131
TTTATTCTGGTTCATCTTCAACATCAACCATGTTCTCTACTCCTCTACTGCTGTTACTGTTAGCAGCTGTTTCCTgtGTTCACTGTGTTGAACTGAGCCAGTCTGGATCTGCAGTTGTAGCACCTGGTCAATCAACTACACTGACCTGTAGAGTTTCTGGATATTCACTGACTGATAGCAGCTACTGTACAAGCTGGATACGACAGCCTGCAGGAAAAGCTCTGGAGAGGGTTGCAAGCATATGTAGTGCTGGTGACACTTACTATAGTGATAAACTAAAAAGCAGGTTTGAAATATCCAGAGACACGTCCAGCAGCACAGTGTCTTTAAGAGGACAGAATCTGCAGACTGAAGATACAGCTGTGTATTACTGCGCTCGACTCTCACAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC111190131 True 392 V_segment 0.45 2 134179 134669

Neighbor

gene id symbol gene type direction distance location
LOC107197483 NA coding upstream 118038 15658 ~ 16141 (+)
LOC111190154 NA coding downstream 99143 233812 ~ 236578 (+)
LOC103041119 NA coding downstream 104105 238774 ~ 239350 (+)
LOC103040202 NA coding downstream 105679 240348 ~ 244545 (+)
LOC111190155 NA coding downstream 111911 246580 ~ 258409 (+)
LOC111190159 NA coding downstream 151390 286059 ~ 287629 (+)
G280298 NA non-coding upstream 94511 38119 ~ 39668 (+)
G280297 NA non-coding upstream 96523 36371 ~ 37656 (+)
G280290 NA non-coding upstream 102646 22417 ~ 31533 (+)
G280332 NA non-coding downstream 57069 191738 ~ 247699 (+)
G280334 NA non-coding downstream 72905 207574 ~ 207855 (+)
G280338 NA non-coding downstream 105685 240354 ~ 249052 (+)
G280345 NA non-coding downstream 117994 252663 ~ 254221 (+)
LOC111190165 NA non-coding downstream 126208 260877 ~ 261488 (+)
LOC111190129 NA other upstream 2025 131584 ~ 132154 (+)
LOC111190130 NA other upstream 6609 127045 ~ 127570 (+)
LOC111190143 NA other upstream 18574 109527 ~ 115605 (+)
LOC111190139 NA other upstream 27164 106306 ~ 107015 (+)
LOC111190141 NA other upstream 29385 102943 ~ 104794 (+)
LOC111190148 NA other downstream 2881 137550 ~ 139641 (+)
LOC111190136 NA other downstream 10738 145407 ~ 146074 (+)
LOC111190149 NA other downstream 14988 149657 ~ 150307 (+)
LOC103032846 NA other downstream 24631 159300 ~ 160048 (+)
LOC111190150 NA other downstream 30573 165242 ~ 165724 (+)

Expression


Co-expression Network