LOC111190134


Basic Information

Item Value
gene id LOC111190134
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172441.1
NCBI id APWO02002039.1
chromosome length 306493
location 202319 ~ 202865 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>LOC111190134
CTGGAGGGCAGAAAAGATCCTGCAGGTCCAACATCAACACAAACCATGTTCTCTACAgctctgctgctcctgctggCAGCTGCTTCCTGTGTTAACTGTGAAGAACTGACTCAGCCTGATTCTATGATCATCCGTCCAGGTCAGAGTCTGACCATCAACTGTAAAGTTTCTTATTCAGTTTCTAGCTATGATACAGCCTGGATCAGACAACCTGCAGGAAAAGCTCTGGAGTGGATTGGACTTATCAGTAGCGGTGGCACACTTTACAGTGATAAACTGAAAAACAAGTTCAGCATGTCTGTTGACAGTGGAACTAACACAGTAACATTACAAGGACAGAATCTGCAGACTGAAGATACAgctgtgtattactgcgcaAGATACACACAGTGATACACACTAATGCACCCATCATACAAAAACCCTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC111190134 True 429 V_segment 0.45 2 202319 202865

Neighbor

gene id symbol gene type direction distance location
LOC107197483 NA coding upstream 186178 15658 ~ 16141 (+)
LOC111190154 NA coding downstream 30947 233812 ~ 236578 (+)
LOC103041119 NA coding downstream 35909 238774 ~ 239350 (+)
LOC103040202 NA coding downstream 37483 240348 ~ 244545 (+)
LOC111190155 NA coding downstream 43715 246580 ~ 258409 (+)
LOC111190159 NA coding downstream 83194 286059 ~ 287629 (+)
G280298 NA non-coding upstream 162651 38119 ~ 39668 (+)
G280297 NA non-coding upstream 164663 36371 ~ 37656 (+)
G280290 NA non-coding upstream 170786 22417 ~ 31533 (+)
G280334 NA non-coding downstream 4709 207574 ~ 207855 (+)
G280338 NA non-coding downstream 37489 240354 ~ 249052 (+)
G280345 NA non-coding downstream 49798 252663 ~ 254221 (+)
LOC111190165 NA non-coding downstream 58012 260877 ~ 261488 (+)
LOC111190156 NA non-coding downstream 64820 267685 ~ 268169 (+)
LOC103033487 NA other upstream 2230 199560 ~ 200089 (+)
LOC103033165 NA other upstream 5327 196391 ~ 196992 (+)
G280333 NA other upstream 6682 195171 ~ 195637 (+)
LOC111190151 NA other upstream 9053 192775 ~ 193266 (+)
LOC111190163 NA other upstream 16813 184947 ~ 185506 (+)
LOC111190135 NA other downstream 13069 215934 ~ 216572 (+)
LOC111190153 NA other downstream 18630 221495 ~ 221954 (+)
LOC103039884 LOC108275153 other downstream 25710 228575 ~ 229121 (+)
LOC103040825 NA other downstream 28414 231279 ~ 231903 (+)
LOC111190157 NA other downstream 69455 272320 ~ 276225 (+)

Expression


Co-expression Network