LOC111190140


Basic Information

Item Value
gene id LOC111190140
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172441.1
NCBI id APWO02002039.1
chromosome length 306493
location 95984 ~ 96561 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>LOC111190140
TTCTGGTTCAGCTTCAACATCAACCATGTTCTCTACTCCTCTACTGCTGTTACTGTTAGCAGCTGTTTCCTgtgTTCACTGTGTTGAACTGAGCCAGTCTGGATCTACAGTTGTAGCACCTGGTCAATCAACTACACTGACCTGTAGAGTTTCTGGATATTCACTGAGTGATAGCAGCTACTGTACAGACTGGATACGACAGCCTGCAGGAAAAGCTCTGGAGTGGGTTGGAGAGATATGTGGAAGTGGTAGCACTTACTACAGTGATAAACTGAAGAGCAGATTTGAAGTTACCAGAGACTCATCCAGCAGCACAGTGTCTTTAAGAGGACAGAATCTGCAGACTGAAGATACAGCTGTGTATTACTGCGCTCGAGCCCCACAGTGAAACACATCAACAGGAACCCTGTACAAAAACCTGCTGctgtaaaaaacacttttgaagATATATTACAGTCAGAACCACATTACAACCAGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC111190140 True 479 V_segment 0.44 2 95984 96561

Neighbor

gene id symbol gene type direction distance location
LOC107197483 NA coding upstream 79843 15658 ~ 16141 (+)
LOC111190154 NA coding downstream 137251 233812 ~ 236578 (+)
LOC103041119 NA coding downstream 142213 238774 ~ 239350 (+)
LOC103040202 NA coding downstream 143787 240348 ~ 244545 (+)
LOC111190155 NA coding downstream 150019 246580 ~ 258409 (+)
LOC111190159 NA coding downstream 189498 286059 ~ 287629 (+)
G280298 NA non-coding upstream 56316 38119 ~ 39668 (+)
G280297 NA non-coding upstream 58328 36371 ~ 37656 (+)
G280290 NA non-coding upstream 64451 22417 ~ 31533 (+)
G280332 NA non-coding downstream 95177 191738 ~ 247699 (+)
G280334 NA non-coding downstream 111013 207574 ~ 207855 (+)
G280338 NA non-coding downstream 143793 240354 ~ 249052 (+)
G280345 NA non-coding downstream 156102 252663 ~ 254221 (+)
LOC111190165 NA non-coding downstream 164316 260877 ~ 261488 (+)
G280315 NA other upstream 3371 92137 ~ 92613 (+)
LOC103027076 NA other upstream 13021 82398 ~ 82963 (+)
LOC111190144 NA other upstream 38423 57049 ~ 57561 (+)
LOC111190138 NA other upstream 51453 43824 ~ 44531 (+)
LOC111190147 NA other downstream 1014 97575 ~ 100328 (+)
G280313 NA other downstream 6002 102563 ~ 138201 (+)
LOC111190141 NA other downstream 6382 102943 ~ 104794 (+)
LOC111190139 NA other downstream 9745 106306 ~ 107015 (+)
LOC111190143 NA other downstream 12966 109527 ~ 115605 (+)

Expression


Co-expression Network