LOC111190144


Basic Information

Item Value
gene id LOC111190144
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172441.1
NCBI id APWO02002039.1
chromosome length 306493
location 57049 ~ 57561 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>LOC111190144
CTCTCAGCATGAAGATCACACTCTCCTTATTACTGCTACTGCTCACCTTCAGCAGTGTGAAATGTCAGAGTATGGAATCATTAGAAACTGCAGTTCAGATAAAACCTGGAGAAACTCTGAGTCTCTCCTGTAGAGGATCTGGATTTAGCTTTGACAGTTACCACTTGCACTGGATCAAAAAACAGGCTGGAAAACCACTGGAGTGGATTGGACGAGCATCAAACAGCGGAAGTGTCAAAGCAAAATCATTTGAAGGCCGATTAGAAGTCAGAAAAGACATTCCCAACAGCATGTTGTATCTGAAACTGTCTGGTGTGACAGCAGAGGATTCAGCTGTGTATTACTGCGCTCGAGAAGCACACTGATACAGAATAGTGGAGACACTGTACAAAAACATGCAGCTGCTTTTAGATGGTTGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC111190144 True 421 V_segment 0.43 2 57049 57561

Neighbor

gene id symbol gene type direction distance location
LOC107197483 NA coding upstream 40908 15658 ~ 16141 (+)
LOC111190154 NA coding downstream 176251 233812 ~ 236578 (+)
LOC103041119 NA coding downstream 181213 238774 ~ 239350 (+)
LOC103040202 NA coding downstream 182787 240348 ~ 244545 (+)
LOC111190155 NA coding downstream 189019 246580 ~ 258409 (+)
LOC111190159 NA coding downstream 228498 286059 ~ 287629 (+)
G280298 NA non-coding upstream 17381 38119 ~ 39668 (+)
G280297 NA non-coding upstream 19393 36371 ~ 37656 (+)
G280290 NA non-coding upstream 25516 22417 ~ 31533 (+)
G280332 NA non-coding downstream 134177 191738 ~ 247699 (+)
G280334 NA non-coding downstream 150013 207574 ~ 207855 (+)
G280338 NA non-coding downstream 182793 240354 ~ 249052 (+)
G280345 NA non-coding downstream 195102 252663 ~ 254221 (+)
LOC111190165 NA non-coding downstream 203316 260877 ~ 261488 (+)
LOC111190138 NA other upstream 12518 43824 ~ 44531 (+)
LOC103027076 NA other downstream 24837 82398 ~ 82963 (+)
G280315 NA other downstream 34576 92137 ~ 92613 (+)
LOC111190140 NA other downstream 38423 95984 ~ 96561 (+)
LOC111190147 NA other downstream 40014 97575 ~ 100328 (+)
G280313 NA other downstream 45002 102563 ~ 138201 (+)

Expression


Co-expression Network