LOC111190148


Basic Information

Item Value
gene id LOC111190148
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172441.1
NCBI id APWO02002039.1
chromosome length 306493
location 137550 ~ 139641 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>LOC111190148
TTTATTCTTGTTCATCTTCAACATCAACCATGTTCTCTACTCCTCTACTGCTGTTACTGTTAGCAGCTGTTTCCTgTGTTCACTGTGTTGAACTGAGCCAGTCTGGATCTACAGTTGTAGCACCTGGTCAATCAACTACACTGACCTGTAGAGTTTCTGGATATTCACTGAGTGATAGCAGCTACTGTACACACTGGATACgaccaggggcATGGATACGACATCCTGCAGGAAAAGCTCTGGAGTGGATTGGGTGGATATGTAGTAGTGGTGGCACTGGATACAgtgataaactaaaaaataagtttCAAATATCCAGAGACACGTCCAGCAGCACAGTGTCTTTAAGAGGACAGAATCTGCAGACTGAAGATACAGCTGTGTATTACTGTGCTCGTCAATACCACAGTGAAACACATCAACAGGAACCCTGTACAAAAACCCTCTATCTGGGAACAACTTCAACATTTACCAGGCTTTTGAAGAGGGAAGTGGTCAAAAGGACCAAAGGGATTTTCAAGGAAAGACAACTGGTGAACAAATCAGTGAACCAGTCACCCAAGTCTCAACATTCAGGTTTTAATGGATTTGCTGCTGATGTATTGGGACCAGAAACTACAGGAGACCTTCAAAGATCTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC111190148 True 641 V_segment 0.43 4 137550 139641

Neighbor

gene id symbol gene type direction distance location
LOC107197483 NA coding upstream 121409 15658 ~ 16141 (+)
LOC111190154 NA coding downstream 94171 233812 ~ 236578 (+)
LOC103041119 NA coding downstream 99133 238774 ~ 239350 (+)
LOC103040202 NA coding downstream 100707 240348 ~ 244545 (+)
LOC111190155 NA coding downstream 106939 246580 ~ 258409 (+)
LOC111190159 NA coding downstream 146418 286059 ~ 287629 (+)
G280298 NA non-coding upstream 97882 38119 ~ 39668 (+)
G280297 NA non-coding upstream 99894 36371 ~ 37656 (+)
G280290 NA non-coding upstream 106017 22417 ~ 31533 (+)
G280332 NA non-coding downstream 52097 191738 ~ 247699 (+)
G280334 NA non-coding downstream 67933 207574 ~ 207855 (+)
G280338 NA non-coding downstream 100713 240354 ~ 249052 (+)
G280345 NA non-coding downstream 113022 252663 ~ 254221 (+)
LOC111190165 NA non-coding downstream 121236 260877 ~ 261488 (+)
LOC111190131 NA other upstream 2881 134179 ~ 134669 (+)
LOC111190129 NA other upstream 5396 131584 ~ 132154 (+)
LOC111190130 NA other upstream 9980 127045 ~ 127570 (+)
LOC111190143 NA other upstream 21945 109527 ~ 115605 (+)
LOC111190139 NA other upstream 30535 106306 ~ 107015 (+)
LOC111190136 NA other downstream 5766 145407 ~ 146074 (+)
LOC111190149 NA other downstream 10016 149657 ~ 150307 (+)
LOC103032846 NA other downstream 19659 159300 ~ 160048 (+)
LOC111190150 NA other downstream 25601 165242 ~ 165724 (+)
LOC111190145 NA other downstream 31620 171261 ~ 171809 (+)

Expression


Co-expression Network