LOC111190150


Basic Information

Item Value
gene id LOC111190150
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172441.1
NCBI id APWO02002039.1
chromosome length 306493
location 165242 ~ 165724 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>LOC111190150
ATGTTCTCCACACTGATCCatctactgctgctactaacaGCTTCTGCACCCTGGGTTGGTTGTATTGAGCTGGATCAGCCTGCAGTCATGGTTGTTAAACCTGGAGAATCTTTCTCCATCGCCTGTAAGATCACTGGATATTCAGCTGAAGGAGGCTGTAATAACTGCTGTACTAACTGGATACGACACTCAATAGGAAAAGCTCCAGAATGGATTGGATGGTTCTGCAGCGAATACAAGAGTGGGGCAATAAGCACAATGAACAGCAAGATCAGTTTCACTGCAGAATCTTCCAgcaacacagtgtttttacaggGGCAGAACTTCCAGTCTGaggacagcgctgtgtattACTGCGTCCGGAACACACAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC111190150 True 375 V_segment 0.47 2 165242 165724

Neighbor

gene id symbol gene type direction distance location
LOC107197483 NA coding upstream 149101 15658 ~ 16141 (+)
LOC111190154 NA coding downstream 68088 233812 ~ 236578 (+)
LOC103041119 NA coding downstream 73050 238774 ~ 239350 (+)
LOC103040202 NA coding downstream 74624 240348 ~ 244545 (+)
LOC111190155 NA coding downstream 80856 246580 ~ 258409 (+)
LOC111190159 NA coding downstream 120335 286059 ~ 287629 (+)
G280298 NA non-coding upstream 125574 38119 ~ 39668 (+)
G280297 NA non-coding upstream 127586 36371 ~ 37656 (+)
G280290 NA non-coding upstream 133709 22417 ~ 31533 (+)
G280332 NA non-coding downstream 26014 191738 ~ 247699 (+)
G280334 NA non-coding downstream 41850 207574 ~ 207855 (+)
G280338 NA non-coding downstream 74630 240354 ~ 249052 (+)
G280345 NA non-coding downstream 86939 252663 ~ 254221 (+)
LOC111190165 NA non-coding downstream 95153 260877 ~ 261488 (+)
LOC103032846 NA other upstream 5194 159300 ~ 160048 (+)
LOC111190149 NA other upstream 14935 149657 ~ 150307 (+)
LOC111190136 NA other upstream 19168 145407 ~ 146074 (+)
LOC111190148 NA other upstream 25601 137550 ~ 139641 (+)
LOC111190131 NA other upstream 30573 134179 ~ 134669 (+)
LOC111190145 NA other downstream 5537 171261 ~ 171809 (+)
LOC111190128 NA other downstream 9457 175181 ~ 175779 (+)
LOC111190164 NA other downstream 11810 177534 ~ 178182 (+)
G280328 NA other downstream 14300 180024 ~ 226732 (+)
LOC111190146 NA other downstream 14304 180028 ~ 181015 (+)

Expression


Co-expression Network