Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC111190164 |
| gene name | NA |
| gene type | misc |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NW_019172441.1 |
| NCBI id | APWO02002039.1 |
| chromosome length | 306493 |
| location | 177534 ~ 178182 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC111190164 | True | 558 | V_segment | 0.44 | 2 | 177534 | 178182 |
| TU384807 | False | 325 | lncRNA | 0.45 | 2 | 177579 | 177994 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC107197483 | NA | coding | upstream | 161393 | 15658 ~ 16141 (+) |
| LOC111190154 | NA | coding | downstream | 55630 | 233812 ~ 236578 (+) |
| LOC103041119 | NA | coding | downstream | 60592 | 238774 ~ 239350 (+) |
| LOC103040202 | NA | coding | downstream | 62166 | 240348 ~ 244545 (+) |
| LOC111190155 | NA | coding | downstream | 68398 | 246580 ~ 258409 (+) |
| LOC111190159 | NA | coding | downstream | 107877 | 286059 ~ 287629 (+) |
| G280298 | NA | non-coding | upstream | 137866 | 38119 ~ 39668 (+) |
| G280297 | NA | non-coding | upstream | 139878 | 36371 ~ 37656 (+) |
| G280290 | NA | non-coding | upstream | 146001 | 22417 ~ 31533 (+) |
| G280332 | NA | non-coding | downstream | 13556 | 191738 ~ 247699 (+) |
| G280334 | NA | non-coding | downstream | 29392 | 207574 ~ 207855 (+) |
| G280338 | NA | non-coding | downstream | 62172 | 240354 ~ 249052 (+) |
| G280345 | NA | non-coding | downstream | 74481 | 252663 ~ 254221 (+) |
| LOC111190165 | NA | non-coding | downstream | 82695 | 260877 ~ 261488 (+) |
| LOC111190128 | NA | other | upstream | 1755 | 175181 ~ 175779 (+) |
| LOC111190145 | NA | other | upstream | 5725 | 171261 ~ 171809 (+) |
| LOC111190150 | NA | other | upstream | 11810 | 165242 ~ 165724 (+) |
| LOC103032846 | NA | other | upstream | 17486 | 159300 ~ 160048 (+) |
| LOC111190149 | NA | other | upstream | 27227 | 149657 ~ 150307 (+) |
| G280328 | NA | other | downstream | 1842 | 180024 ~ 226732 (+) |
| LOC111190146 | NA | other | downstream | 1846 | 180028 ~ 181015 (+) |
| LOC111190163 | NA | other | downstream | 6765 | 184947 ~ 185506 (+) |
| LOC111190151 | NA | other | downstream | 14593 | 192775 ~ 193266 (+) |
| G280333 | NA | other | downstream | 16989 | 195171 ~ 195637 (+) |
