G280290


Basic Information

Item Value
gene id G280290
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172441.1
NCBI id APWO02002039.1
chromosome length 306493
location 22417 ~ 31533 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU384731
CTTTAGATGAGAGTTGCTGTACATATGTTAAACCTGCATGTGTGACTTCACAGCTGTATTTGGTGTCCTTGCTTGTTTTGTTGGCTTGAAGCAAACTGACAGCTTTGAAAGAGCCTGTAGGACTTTCAGTAATTTCCCAGTCAATGCCTTTGACTTCCTGGTTGTCTTCTTTCCACTTAATACTGAGCTTTTTTGGGGAGAAGTCCTCAATTAAACACATAATAGATTGACCAACTTCACCCACGTGGATGACTGGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU384731 True 258 lncRNA 0.41 2 22417 31533

Neighbor

gene id symbol gene type direction distance location
LOC107197483 NA coding upstream 6276 15658 ~ 16141 (+)
LOC111190154 NA coding downstream 202279 233812 ~ 236578 (+)
LOC103041119 NA coding downstream 207241 238774 ~ 239350 (+)
LOC103040202 NA coding downstream 208815 240348 ~ 244545 (+)
LOC111190155 NA coding downstream 215047 246580 ~ 258409 (+)
LOC111190159 NA coding downstream 254526 286059 ~ 287629 (+)
G280297 NA non-coding downstream 4838 36371 ~ 37656 (+)
G280298 NA non-coding downstream 6586 38119 ~ 39668 (+)
G280332 NA non-coding downstream 160205 191738 ~ 247699 (+)
G280334 NA non-coding downstream 176041 207574 ~ 207855 (+)
G280338 NA non-coding downstream 208821 240354 ~ 249052 (+)
LOC111190138 NA other downstream 12291 43824 ~ 44531 (+)
LOC111190144 NA other downstream 25516 57049 ~ 57561 (+)
LOC103027076 NA other downstream 50865 82398 ~ 82963 (+)
G280315 NA other downstream 60604 92137 ~ 92613 (+)
LOC111190140 NA other downstream 64451 95984 ~ 96561 (+)

Expression


Co-expression Network