G280315


Basic Information

Item Value
gene id G280315
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172441.1
NCBI id APWO02002039.1
chromosome length 306493
location 92137 ~ 92613 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU384788
CACACATCAGCTCAGCTAcaacctccaccatgtttagcaGATCTCTAATACTGCTGATACTCACTAACCTACCATGTTTTCAGAGTCAGACTCTCACTCAGTCTGAATCTGTGGTTATAAAACCTGGAGAATCTCATAAACTGACCTGTACAGGATCTGGATTCACATTCAGAAGCTATCCACTGGCCTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGATTGCGTTTATACACACAGCCAGCACTCCAATCTACTATTCTCAGCCAGTTCAGGGAAGATTCACAATCTCCAGATCTGACTCCAGCAGTCAGGTATATTTACAGATGAACAATCTGAGGAGTGAAGATACTGCTGTGTATTACTGTACCAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU384788 True 377 TUCP 0.45 2 92137 92613

Neighbor

gene id symbol gene type direction distance location
LOC107197483 NA coding upstream 75996 15658 ~ 16141 (+)
LOC111190154 NA coding downstream 141199 233812 ~ 236578 (+)
LOC103041119 NA coding downstream 146161 238774 ~ 239350 (+)
LOC103040202 NA coding downstream 147735 240348 ~ 244545 (+)
LOC111190155 NA coding downstream 153967 246580 ~ 258409 (+)
LOC111190159 NA coding downstream 193446 286059 ~ 287629 (+)
G280298 NA non-coding upstream 52469 38119 ~ 39668 (+)
G280297 NA non-coding upstream 54481 36371 ~ 37656 (+)
G280290 NA non-coding upstream 60604 22417 ~ 31533 (+)
G280332 NA non-coding downstream 99125 191738 ~ 247699 (+)
G280334 NA non-coding downstream 114961 207574 ~ 207855 (+)
G280338 NA non-coding downstream 147741 240354 ~ 249052 (+)
G280345 NA non-coding downstream 160050 252663 ~ 254221 (+)
LOC111190165 NA non-coding downstream 168264 260877 ~ 261488 (+)
LOC103027076 NA other upstream 9174 82398 ~ 82963 (+)
LOC111190144 NA other upstream 34576 57049 ~ 57561 (+)
LOC111190138 NA other upstream 47606 43824 ~ 44531 (+)
LOC111190140 NA other downstream 3371 95984 ~ 96561 (+)
LOC111190147 NA other downstream 4962 97575 ~ 100328 (+)
G280313 NA other downstream 9950 102563 ~ 138201 (+)
LOC111190141 NA other downstream 10330 102943 ~ 104794 (+)
LOC111190139 NA other downstream 13693 106306 ~ 107015 (+)

Expression


Co-expression Network