G280332


Basic Information

Item Value
gene id G280332
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172441.1
NCBI id APWO02002039.1
chromosome length 306493
location 191738 ~ 247699 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU384824
cgaggaccagcagactgcgagacagccccatccatcaggctgtgaggatgctgaactctcttcctgctctaccccccatcccaatcctgcccccagcacacactcactcagcatcctgaacccccccactaataaagtactgaaactctgcactacaatgcacaaagtactggtcccttccaaacggacttgcactacacaacacctgcactactgatatacttgcactgtctatacgcactttaattccacttaattaaactgtgaactttaaggacttacgcacccattcactttaccagccttaagctatataccatataccgtatttgcactactgttatttactatttttactgtcattccatctcaatcaccatcaatattgcactattgtcttacgtatgtttattgtgtcttgctgtattgaacatatagtgtctcccactcttttatattatatattatattataatatatataatatatatatattatatatatatatatatatatatatatatatatatatatatatatatataaataaaaaaatatatcagtgGTGTGAACGTGCTGCCTTCCTTTAtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU384824 True 591 lncRNA 0.36 2 191738 247699

Neighbor

gene id symbol gene type direction distance location
LOC107197483 NA coding upstream 175597 15658 ~ 16141 (+)
LOC111190159 NA coding downstream 38360 286059 ~ 287629 (+)
LOC111190133 NA coding downstream 40880 288579 ~ 289221 (+)
LOC111190160 NA coding downstream 42634 290333 ~ 290884 (+)
LOC111190137 NA coding downstream 46605 294304 ~ 294920 (+)
LOC107197420 NA coding downstream 51970 299669 ~ 300531 (+)
G280298 NA non-coding upstream 152070 38119 ~ 39668 (+)
G280297 NA non-coding upstream 154082 36371 ~ 37656 (+)
G280290 NA non-coding upstream 160205 22417 ~ 31533 (+)
G280345 NA non-coding downstream 4964 252663 ~ 254221 (+)
LOC111190165 NA non-coding downstream 13178 260877 ~ 261488 (+)
LOC111190156 NA non-coding downstream 19986 267685 ~ 268169 (+)
LOC103040519 NA non-coding downstream 22609 270308 ~ 270906 (+)
G280350 NA non-coding downstream 33357 281056 ~ 281292 (+)
LOC111190163 NA other upstream 6232 184947 ~ 185506 (+)
LOC111190146 NA other upstream 10723 180028 ~ 181015 (+)
LOC111190164 NA other upstream 13556 177534 ~ 178182 (+)
LOC111190128 NA other upstream 15959 175181 ~ 175779 (+)
LOC111190145 NA other upstream 19929 171261 ~ 171809 (+)
LOC111190157 NA other downstream 24621 272320 ~ 276225 (+)
LOC111190162 NA other downstream 34576 282275 ~ 282898 (+)
G280341 NA other downstream 36743 284442 ~ 286535 (+)
LOC111190158 NA other downstream 36764 284463 ~ 285888 (+)

Expression


Co-expression Network