LOC111190154


Basic Information

Item Value
gene id LOC111190154
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172441.1
NCBI id APWO02002039.1
chromosome length 306493
location 233812 ~ 236578 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022663913.1
CTTTAACTGATCACACCAGCACCATGTTCTCCATATCATTACTGCTGATCCAGCTGCTGACTATAACATgTGTTCACTCTCAGGTTGTTCtcacacagtctgaacagtcaGTAGCAGTGGCTCCAGGAGGATCCCACAAACTCACCTGTAGCTGCAGTGGATTCACTGTGAGGGACTATGGCATGCACTGGATCAGACAGGCTCCTGGTAAAGGACCGGAatggattatttattattattctgattCTACTAAAAAATTTTCCCAGGCAGTGCAGGGCAGATTCACAGCATGCAAGGACGACTCAAAATTCGACCTGCAAATGACTCAACTGAAGCCTGAAGATACTGCAGTGTATTACTGTGCTAGAGATGCACTGTGGTGGAACTCATACAGACAGCTGTACAAAAACcctgcaaGTGTTCACTGTAATGAACTGACCCAACCTGGATCCATGATGGTGCGTCCAGGTCAGAGTCTGACCATCAACTGTAAAGTTTCATATTCAGTTACAAGCTGGAGCACAGGTTATATCAGACAACCTGCAGGAAAAGCTCTGGAGTGGATTGGAAATATCTACATGGATGGTAGCACAGACTacagtaataaactaaaaaacaagTTCAGCATCTCCAGAGACACTGGAACTAACACAATAACATTACAAGGACAGAACCTGCAGACTGAAGATACAGCTGTGTATTACTGTGCAAGACTCTCACAGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022663913.1 True 725 mRNA 0.44 3 233812 236578

Neighbor

gene id symbol gene type direction distance location
LOC107197483 NA coding upstream 217671 15658 ~ 16141 (+)
LOC103041119 NA coding downstream 2196 238774 ~ 239350 (+)
LOC103040202 NA coding downstream 3770 240348 ~ 244545 (+)
LOC111190155 NA coding downstream 10002 246580 ~ 258409 (+)
LOC111190159 NA coding downstream 49481 286059 ~ 287629 (+)
LOC111190133 NA coding downstream 52001 288579 ~ 289221 (+)
G280334 NA non-coding upstream 25957 207574 ~ 207855 (+)
G280298 NA non-coding upstream 194144 38119 ~ 39668 (+)
G280297 NA non-coding upstream 196156 36371 ~ 37656 (+)
G280290 NA non-coding upstream 202279 22417 ~ 31533 (+)
G280338 NA non-coding downstream 3776 240354 ~ 249052 (+)
G280345 NA non-coding downstream 16085 252663 ~ 254221 (+)
LOC111190165 NA non-coding downstream 24299 260877 ~ 261488 (+)
LOC111190156 NA non-coding downstream 31107 267685 ~ 268169 (+)
LOC103040519 NA non-coding downstream 33730 270308 ~ 270906 (+)
LOC103040825 NA other upstream 1909 231279 ~ 231903 (+)
LOC103039884 LOC108275153 other upstream 4691 228575 ~ 229121 (+)
G280328 NA other upstream 7080 180024 ~ 226732 (+)
LOC111190153 NA other upstream 11858 221495 ~ 221954 (+)
LOC111190135 NA other upstream 17240 215934 ~ 216572 (+)
LOC111190157 NA other downstream 35742 272320 ~ 276225 (+)
LOC111190162 NA other downstream 45697 282275 ~ 282898 (+)
G280341 NA other downstream 47864 284442 ~ 286535 (+)
LOC111190158 NA other downstream 47885 284463 ~ 285888 (+)

Expression


Co-expression Network