G78450


Basic Information

Item Value
gene id G78450
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 6747959 ~ 6748415 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU105745
TCAAcaaaacatatagaattattaaGTGTAcaaaaattattaaacaaaccagaatatgttttatattttacattcttcaaaggagcacctcttgcttagatgacaggtTTGAACAtcttggtattttctcagtcagctttatatggtagaatcacctggatctgacttttacctcagcaatgatcaaaatatagaattaaataacattgctgttcccttaaattacCTGCTGTCGTACCTTCATAGCATGAACGCGCAAGTTAGTATCCTCTGTTGAGACGTGCAAAAgcgctgtgctgttaagatacaaacccgccaaagtcagagcgcacctgcctcttaaaggaataataagtgacacactgatttatgGTGACGCTGGTtcatttcacattatgcccaaaacacacccatgaatatttaacccttgtgtggtgttcatatttttgttactcgt

Function

NR:

description
protein RRNAD1 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105745 True 457 lncRNA 0.37 1 6747959 6748415

Neighbor

gene id symbol gene type direction distance location
LOC103024548 NA coding downstream 25683 6713456 ~ 6722276 (-)
LOC103024242 LOC108430197 coding downstream 39998 6689304 ~ 6707961 (-)
luzp1 luzp1 coding downstream 1484963 5210729 ~ 5262996 (-)
togaram1 NA coding downstream 2069549 4666571 ~ 4678410 (-)
fancm NA coding downstream 2082472 4624101 ~ 4665487 (-)
nphp1 nphp1 coding upstream 703 6749118 ~ 6768199 (-)
LOC103025187 crip3,LOC107583529,LOC107744353,LOC107553273,LOC107717123,LOC107663266 coding upstream 146513 6894928 ~ 6924055 (-)
acss1 NA coding upstream 181355 6929770 ~ 6963428 (-)
LOC103026718 kcnh1a,LOC108433307,LOC107721370,LOC107659257 coding upstream 342630 7091045 ~ 7193590 (-)
LOC111193180 NA coding upstream 527985 7276400 ~ 7277784 (-)
G78464 NA non-coding downstream 177 6746078 ~ 6747782 (-)
G78463 NA non-coding downstream 2403 6744965 ~ 6745556 (-)
G78455 NA non-coding downstream 17898 6729839 ~ 6730061 (-)
G78453 NA non-coding downstream 21105 6726646 ~ 6726854 (-)
G78448 NA non-coding downstream 37851 6709239 ~ 6710108 (-)
G78466 NA non-coding upstream 20345 6768760 ~ 6768961 (-)
LOC111193175 NA non-coding upstream 21706 6770121 ~ 6772903 (-)
G78492 NA non-coding upstream 87717 6836132 ~ 6838095 (-)
G78560 NA non-coding upstream 137690 6886105 ~ 6886572 (-)
G78563 NA non-coding upstream 141763 6890178 ~ 6890405 (-)
G78297 kdm1a other downstream 1561601 5184792 ~ 5186358 (-)
G78083 NA other downstream 2541575 4045434 ~ 4206384 (-)
G78023 scfd1 other downstream 2907389 3834562 ~ 3840570 (-)
prkd1 prkd1,LOC107590910,LOC107719483,LOC107733145 other downstream 3033602 3645097 ~ 3714357 (-)
G77892 NA other downstream 3398970 3297582 ~ 3348989 (-)
LOC111193177 kcnh1,LOC108433307,LOC106904951,LOC103476431,LOC102309410,LOC103370850,LOC103137420,LOC101155792 other upstream 450494 7198909 ~ 7220854 (-)
LOC111193183 NA other upstream 1727982 8476397 ~ 8517648 (-)
spdya spdya other upstream 1884231 8632646 ~ 8641832 (-)
LOC111193185 stac,LOC107715935,LOC107670884 other upstream 1902213 8650628 ~ 8655017 (-)
LOC103027354 LOC103027354,LOC108438753 other upstream 3286271 10034686 ~ 10071884 (-)

Expression


Co-expression Network