G78455


Basic Information

Item Value
gene id G78455
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 6729839 ~ 6730061 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU105750
ctgccTAGCTAGTTGGCCAAAAGTATTTCAGGTAGATCTTGGTTAAACTAATAAAACGATCATCGTGCTCATTTTATTACCTTAAGACCAGTGTATACGTTCAAGACCCCTGACAAACcaaattattagttttttatagctagctagcactagtaacctagctaaaacacaGTGGCTAGGTGGCTAGTTTGCTTACCTAACAGTTTTGATAGCTAATAAGCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105750 True 223 lncRNA 0.37 1 6729839 6730061

Neighbor

gene id symbol gene type direction distance location
LOC103024548 NA coding downstream 7563 6713456 ~ 6722276 (-)
LOC103024242 LOC108430197 coding downstream 21878 6689304 ~ 6707961 (-)
luzp1 luzp1 coding downstream 1466843 5210729 ~ 5262996 (-)
togaram1 NA coding downstream 2051429 4666571 ~ 4678410 (-)
fancm NA coding downstream 2064352 4624101 ~ 4665487 (-)
nphp1 nphp1 coding upstream 19057 6749118 ~ 6768199 (-)
LOC103025187 crip3,LOC107583529,LOC107744353,LOC107553273,LOC107717123,LOC107663266 coding upstream 164867 6894928 ~ 6924055 (-)
acss1 NA coding upstream 199709 6929770 ~ 6963428 (-)
LOC103026718 kcnh1a,LOC108433307,LOC107721370,LOC107659257 coding upstream 360984 7091045 ~ 7193590 (-)
LOC111193180 NA coding upstream 546339 7276400 ~ 7277784 (-)
G78453 NA non-coding downstream 2985 6726646 ~ 6726854 (-)
G78448 NA non-coding downstream 19731 6709239 ~ 6710108 (-)
G78447 NA non-coding downstream 21008 6708531 ~ 6708831 (-)
G78435 mrps5 non-coding downstream 46744 6629689 ~ 6683095 (-)
G78463 NA non-coding upstream 14904 6744965 ~ 6745556 (-)
G78464 NA non-coding upstream 16017 6746078 ~ 6747782 (-)
G78450 NA non-coding upstream 17898 6747959 ~ 6748415 (-)
G78466 NA non-coding upstream 38699 6768760 ~ 6768961 (-)
LOC111193175 NA non-coding upstream 40060 6770121 ~ 6772903 (-)
G78297 kdm1a other downstream 1543481 5184792 ~ 5186358 (-)
G78083 NA other downstream 2523455 4045434 ~ 4206384 (-)
G78023 scfd1 other downstream 2889269 3834562 ~ 3840570 (-)
prkd1 prkd1,LOC107590910,LOC107719483,LOC107733145 other downstream 3015482 3645097 ~ 3714357 (-)
G77892 NA other downstream 3380850 3297582 ~ 3348989 (-)
LOC111193177 kcnh1,LOC108433307,LOC106904951,LOC103476431,LOC102309410,LOC103370850,LOC103137420,LOC101155792 other upstream 468848 7198909 ~ 7220854 (-)
LOC111193183 NA other upstream 1746336 8476397 ~ 8517648 (-)
spdya spdya other upstream 1902585 8632646 ~ 8641832 (-)
LOC111193185 stac,LOC107715935,LOC107670884 other upstream 1920567 8650628 ~ 8655017 (-)
LOC103027354 LOC103027354,LOC108438753 other upstream 3304625 10034686 ~ 10071884 (-)

Expression


Co-expression Network