G78466


Basic Information

Item Value
gene id G78466
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 6768760 ~ 6768961 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU105766
TCTAACTTAAAAAGCACTCACACAACAAGCTATAAACCACACGATAAGCCTAATACTTTTAGGACTGGCAGGAGGTGCATTGCAATACCAACCTACCTCACTGTAACTTCTTTTAAACGCCTATTACAGTAAAATCAAGATTTTACTACTTTAATAGTTCCCAATGAGTAACATAGCTTAATCATAATAAAGAATAATgacg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105766 True 202 lncRNA 0.34 1 6768760 6768961

Neighbor

gene id symbol gene type direction distance location
nphp1 nphp1 coding downstream 561 6749118 ~ 6768199 (-)
LOC103024548 NA coding downstream 46484 6713456 ~ 6722276 (-)
LOC103024242 LOC108430197 coding downstream 60799 6689304 ~ 6707961 (-)
luzp1 luzp1 coding downstream 1505764 5210729 ~ 5262996 (-)
togaram1 NA coding downstream 2090350 4666571 ~ 4678410 (-)
LOC103025187 crip3,LOC107583529,LOC107744353,LOC107553273,LOC107717123,LOC107663266 coding upstream 125967 6894928 ~ 6924055 (-)
acss1 NA coding upstream 160809 6929770 ~ 6963428 (-)
LOC103026718 kcnh1a,LOC108433307,LOC107721370,LOC107659257 coding upstream 322084 7091045 ~ 7193590 (-)
LOC111193180 NA coding upstream 507439 7276400 ~ 7277784 (-)
iars2 iars2,LOC107654863,LOC107659255,LOC107582886,LOC107583609,LOC107715938 coding upstream 547585 7316546 ~ 7337779 (-)
G78450 NA non-coding downstream 20345 6747959 ~ 6748415 (-)
G78464 NA non-coding downstream 20978 6746078 ~ 6747782 (-)
G78463 NA non-coding downstream 23204 6744965 ~ 6745556 (-)
G78455 NA non-coding downstream 38699 6729839 ~ 6730061 (-)
G78453 NA non-coding downstream 41906 6726646 ~ 6726854 (-)
LOC111193175 NA non-coding upstream 1160 6770121 ~ 6772903 (-)
G78492 NA non-coding upstream 67171 6836132 ~ 6838095 (-)
G78560 NA non-coding upstream 117144 6886105 ~ 6886572 (-)
G78563 NA non-coding upstream 121217 6890178 ~ 6890405 (-)
G78566 NA non-coding upstream 129791 6898752 ~ 6906864 (-)
G78297 kdm1a other downstream 1582402 5184792 ~ 5186358 (-)
G78083 NA other downstream 2562376 4045434 ~ 4206384 (-)
G78023 scfd1 other downstream 2928190 3834562 ~ 3840570 (-)
prkd1 prkd1,LOC107590910,LOC107719483,LOC107733145 other downstream 3054403 3645097 ~ 3714357 (-)
G77892 NA other downstream 3419771 3297582 ~ 3348989 (-)
LOC111193177 kcnh1,LOC108433307,LOC106904951,LOC103476431,LOC102309410,LOC103370850,LOC103137420,LOC101155792 other upstream 429948 7198909 ~ 7220854 (-)
LOC111193183 NA other upstream 1707436 8476397 ~ 8517648 (-)
spdya spdya other upstream 1863685 8632646 ~ 8641832 (-)
LOC111193185 stac,LOC107715935,LOC107670884 other upstream 1881667 8650628 ~ 8655017 (-)
LOC103027354 LOC103027354,LOC108438753 other upstream 3265725 10034686 ~ 10071884 (-)

Expression


Co-expression Network