G79064


Basic Information

Item Value
gene id G79064
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 9596012 ~ 9596425 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU106568
ctccacactcctacatttacacacctccacactcccacatttacacacctccacactcctacatttacacacctccacactcctacatttacacacctccacactctacatttacacacctccacactcctacatttacacacctccacactcctacatttacacacctccacactcctacatttacacacctccacactcccacatttacacacctcctcactcctacatttacacacctccacactcctacatttacacacctccacactcctacatttacacacctccacactcctacatttacacacctccacactcctacatttacacacctccacactcctacatttacacacctccacactcccacatttacacacctccacactcctacatttacacacctccTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106568 True 414 lncRNA 0.47 1 9596012 9596425

Neighbor

gene id symbol gene type direction distance location
LOC103043477 esrrg,LOC107582200,LOC107733169 coding downstream 418317 9056068 ~ 9177695 (-)
ush2a ush2a,LOC108444108,LOC108414482 coding downstream 569456 8768662 ~ 9026556 (-)
wdr43 wdr43 coding downstream 973429 8607944 ~ 8622583 (-)
LOC103047224 LOC103047224,LOC108433332,LOC107583588 coding downstream 991496 8601082 ~ 8604516 (-)
LOC103047525 LOC108433331 coding downstream 1015951 8575266 ~ 8580061 (-)
LOC111193187 NA coding upstream 241553 9837978 ~ 9838726 (-)
LOC103045212 LOC108441044,LOC108269989,LOC107594821,LOC107719497,LOC107590922,LOC107733139 coding upstream 351087 9947512 ~ 10023607 (-)
LOC111193127 NA coding upstream 443916 10040341 ~ 10041065 (-)
id3 id3 coding upstream 487783 10084208 ~ 10087040 (-)
msra msra,si:ch1073-358c10.1 coding upstream 537557 10133982 ~ 10171770 (-)
G79039 NA non-coding downstream 236202 9359578 ~ 9359810 (-)
G78986 NA non-coding downstream 1015186 8580583 ~ 8580826 (-)
G78983 NA non-coding downstream 1032485 8562098 ~ 8563527 (-)
G78978 NA non-coding downstream 1058388 8535936 ~ 8537624 (-)
G78890 NA non-coding downstream 1163728 8428518 ~ 8432284 (-)
G79067 NA non-coding upstream 17298 9613723 ~ 9613985 (-)
G79080 NA non-coding upstream 50258 9646683 ~ 9647063 (-)
LOC111193186 ttc27,LOC107689788,LOC107670805 non-coding upstream 116615 9713040 ~ 9716352 (-)
G79222 greb1,LOC107594824 non-coding upstream 205103 9801528 ~ 9807931 (-)
LOC111193188 NA non-coding upstream 281894 9878319 ~ 9930504 (-)
LOC111193185 stac,LOC107715935,LOC107670884 other downstream 940995 8650628 ~ 8655017 (-)
spdya spdya other downstream 954180 8632646 ~ 8641832 (-)
LOC111193183 NA other downstream 1078364 8476397 ~ 8517648 (-)
LOC111193177 kcnh1,LOC108433307,LOC106904951,LOC103476431,LOC102309410,LOC103370850,LOC103137420,LOC101155792 other downstream 2375158 7198909 ~ 7220854 (-)
G78297 kdm1a other downstream 4409654 5184792 ~ 5186358 (-)
LOC103027354 LOC103027354,LOC108438753 other upstream 438261 10034686 ~ 10071884 (-)
LOC103027264 NA other upstream 698063 10294488 ~ 10336716 (-)
G79582 NA other upstream 1332215 10928640 ~ 10929596 (-)
ltbp1 ltbp1 other upstream 1345262 10941687 ~ 11183941 (-)
G79865 NA other upstream 2373016 11969441 ~ 11971939 (-)

Expression


Co-expression Network