G79268


Basic Information

Item Value
gene id G79268
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 9997948 ~ 9998575 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU106817
CCCAATTGTGAACTAAATTTGAGATATTTTGTGTACATAGGAAAAGCCTTAGAAATTTTTGTGCAGCTCATGAAAAATGCATtgcgtatttttttttgtttggtgtaTAGGCTGCGATTATTGTTACGGCTTGATTACAGAAGGTAAAAGGCTCCAGCATCTTAAATGACCGCAACACATGGTACCTTTAACCCACCACAAAACGTTCTGCAGACCACACCAAAATTGaataaagaatttaaaatatgaacAAATATAGCACATTAATCCTGTAGCCCATCTATGATGACTAAAACCCagacaataatatatataaaacatttaactcAGATATGCAACTAATATAAACAGAAGACATTGTTGGCCAACACCTCCCTAGCAGTACCCCTGCGGCCCACCGGGGCCTCAAAGAATAGCAGTACTCCTGCGGCCCACTGGGGCCTCAAAGAATAGGGGTACTTCTGCGGCCCACTGGGGCCTCAAAGAATAGGGGTACTTCTGCAGCCCACTGGGGCCTCAAAGGATAGCGATACACCTGCGGTCCACTGGGGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106817 True 554 lncRNA 0.43 2 9997948 9998575

Neighbor

gene id symbol gene type direction distance location
LOC111193187 NA coding downstream 159222 9837978 ~ 9838726 (-)
LOC103043477 esrrg,LOC107582200,LOC107733169 coding downstream 820253 9056068 ~ 9177695 (-)
ush2a ush2a,LOC108444108,LOC108414482 coding downstream 971392 8768662 ~ 9026556 (-)
wdr43 wdr43 coding downstream 1375365 8607944 ~ 8622583 (-)
LOC103047224 LOC103047224,LOC108433332,LOC107583588 coding downstream 1393432 8601082 ~ 8604516 (-)
LOC111193127 NA coding upstream 41766 10040341 ~ 10041065 (-)
id3 id3 coding upstream 85633 10084208 ~ 10087040 (-)
msra msra,si:ch1073-358c10.1 coding upstream 135407 10133982 ~ 10171770 (-)
ythdf2 ythdf2,LOC107721611,LOC107654833,LOC107697702 coding upstream 206560 10205135 ~ 10222403 (-)
LOC103026970 NA coding upstream 429810 10428385 ~ 10475469 (-)
G79266 NA non-coding downstream 57015 9938191 ~ 9940933 (-)
LOC111193188 NA non-coding downstream 67444 9878319 ~ 9930504 (-)
G79251 NA non-coding downstream 96992 9899544 ~ 9900956 (-)
G79222 greb1,LOC107594824 non-coding downstream 190017 9801528 ~ 9807931 (-)
LOC111193186 ttc27,LOC107689788,LOC107670805 non-coding downstream 281596 9713040 ~ 9716352 (-)
G79269 NA non-coding upstream 320 9998895 ~ 10000818 (-)
G79285 NA non-coding upstream 102961 10101536 ~ 10101746 (-)
G79288 NA non-coding upstream 106848 10105423 ~ 10105681 (-)
G79290 NA non-coding upstream 110229 10108804 ~ 10114162 (-)
LOC111193189 NA non-coding upstream 139408 10137983 ~ 10141355 (-)
LOC111193185 stac,LOC107715935,LOC107670884 other downstream 1342931 8650628 ~ 8655017 (-)
spdya spdya other downstream 1356116 8632646 ~ 8641832 (-)
LOC111193183 NA other downstream 1480300 8476397 ~ 8517648 (-)
LOC111193177 kcnh1,LOC108433307,LOC106904951,LOC103476431,LOC102309410,LOC103370850,LOC103137420,LOC101155792 other downstream 2777094 7198909 ~ 7220854 (-)
G78297 kdm1a other downstream 4811590 5184792 ~ 5186358 (-)
LOC103027354 LOC103027354,LOC108438753 other upstream 36111 10034686 ~ 10071884 (-)
LOC103027264 NA other upstream 295913 10294488 ~ 10336716 (-)
G79582 NA other upstream 930065 10928640 ~ 10929596 (-)
ltbp1 ltbp1 other upstream 943112 10941687 ~ 11183941 (-)
G79865 NA other upstream 1970866 11969441 ~ 11971939 (-)

Expression


Co-expression Network