G79288


Basic Information

Item Value
gene id G79288
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 10105423 ~ 10105681 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU106838
TAGTACCAGGTTGGACCAACttttgccttcagaactgccttaatccttCATGGCATAGATTCaacaaggtactggaaacattcctcagagagTCTGGTCCATATTGACATGATAGCATCAtgcagttgctgcagatttgtcGGCTGCACATCTATGATGCAAATGTCCTGTTGCAccacatcccatcccatcccaaaggtgctctattggattgagatctggtgaGTACAGTTCTGTGGAGAACATTCCAGTACAGTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106838 True 259 lncRNA 0.45 1 10105423 10105681

Neighbor

gene id symbol gene type direction distance location
id3 id3 coding downstream 18383 10084208 ~ 10087040 (-)
LOC111193127 NA coding downstream 64358 10040341 ~ 10041065 (-)
LOC103045212 LOC108441044,LOC108269989,LOC107594821,LOC107719497,LOC107590922,LOC107733139 coding downstream 81816 9947512 ~ 10023607 (-)
LOC111193187 NA coding downstream 266697 9837978 ~ 9838726 (-)
LOC103043477 esrrg,LOC107582200,LOC107733169 coding downstream 927728 9056068 ~ 9177695 (-)
msra msra,si:ch1073-358c10.1 coding upstream 28301 10133982 ~ 10171770 (-)
ythdf2 ythdf2,LOC107721611,LOC107654833,LOC107697702 coding upstream 99454 10205135 ~ 10222403 (-)
LOC103026970 NA coding upstream 322704 10428385 ~ 10475469 (-)
LOC103026375 ankrd1,LOC107583650 coding upstream 371981 10477662 ~ 10488854 (-)
LOC103025430 NA coding upstream 532167 10637848 ~ 10640240 (-)
G79285 NA non-coding downstream 3677 10101536 ~ 10101746 (-)
G79269 NA non-coding downstream 104605 9998895 ~ 10000818 (-)
G79268 NA non-coding downstream 106848 9997948 ~ 9998575 (-)
G79266 NA non-coding downstream 164490 9938191 ~ 9940933 (-)
LOC111193188 NA non-coding downstream 174919 9878319 ~ 9930504 (-)
G79290 NA non-coding upstream 3123 10108804 ~ 10114162 (-)
LOC111193189 NA non-coding upstream 32302 10137983 ~ 10141355 (-)
G79347 NA non-coding upstream 153921 10259602 ~ 10259882 (-)
G79357 NA non-coding upstream 195388 10301069 ~ 10301293 (-)
G79515 NA non-coding upstream 400666 10506347 ~ 10557458 (-)
LOC103027354 LOC103027354,LOC108438753 other downstream 33539 10034686 ~ 10071884 (-)
LOC111193185 stac,LOC107715935,LOC107670884 other downstream 1450406 8650628 ~ 8655017 (-)
spdya spdya other downstream 1463591 8632646 ~ 8641832 (-)
LOC111193183 NA other downstream 1587775 8476397 ~ 8517648 (-)
LOC111193177 kcnh1,LOC108433307,LOC106904951,LOC103476431,LOC102309410,LOC103370850,LOC103137420,LOC101155792 other downstream 2884569 7198909 ~ 7220854 (-)
LOC103027264 NA other upstream 188807 10294488 ~ 10336716 (-)
G79582 NA other upstream 822959 10928640 ~ 10929596 (-)
ltbp1 ltbp1 other upstream 836006 10941687 ~ 11183941 (-)
G79865 NA other upstream 1863760 11969441 ~ 11971939 (-)
G79945 NA other upstream 2051905 12157586 ~ 12192028 (-)

Expression


Co-expression Network