Gene
RNA
| Item | Value |
|---|---|
| gene id | G79533 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035905.1 |
| NCBI id | CM008308.1 |
| chromosome length | 42966623 |
| location | 10634500 ~ 10635093 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU107156 | True | 545 | lncRNA | 0.49 | 2 | 10634500 | 10635093 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC103026375 | ankrd1,LOC107583650 | coding | downstream | 145646 | 10477662 ~ 10488854 (-) |
| LOC103026970 | NA | coding | downstream | 159031 | 10428385 ~ 10475469 (-) |
| ythdf2 | ythdf2,LOC107721611,LOC107654833,LOC107697702 | coding | downstream | 412097 | 10205135 ~ 10222403 (-) |
| msra | msra,si:ch1073-358c10.1 | coding | downstream | 462730 | 10133982 ~ 10171770 (-) |
| id3 | id3 | coding | downstream | 547460 | 10084208 ~ 10087040 (-) |
| LOC103025430 | NA | coding | upstream | 2755 | 10637848 ~ 10640240 (-) |
| fgfbp3 | NA | coding | upstream | 46063 | 10681156 ~ 10684935 (-) |
| LOC103026670 | LOC103026670,LOC108430189 | coding | upstream | 80274 | 10715367 ~ 10717840 (-) |
| LOC103040295 | LOC108430229 | coding | upstream | 155551 | 10790644 ~ 10798802 (-) |
| rasgrp3 | rasgrp3,LOC107744459,LOC107670874,LOC107689794,LOC106576952 | coding | upstream | 187789 | 10822882 ~ 10936263 (-) |
| G79515 | NA | non-coding | downstream | 77042 | 10506347 ~ 10557458 (-) |
| G79514 | NA | non-coding | downstream | 77632 | 10516926 ~ 10556868 (-) |
| G79357 | NA | non-coding | downstream | 333207 | 10301069 ~ 10301293 (-) |
| G79347 | NA | non-coding | downstream | 374618 | 10259602 ~ 10259882 (-) |
| LOC111193189 | NA | non-coding | downstream | 493145 | 10137983 ~ 10141355 (-) |
| G79602 | NA | non-coding | upstream | 575958 | 11211051 ~ 11217908 (-) |
| LOC111193138 | NA | non-coding | upstream | 736986 | 11372079 ~ 11375380 (-) |
| G79633 | NA | non-coding | upstream | 879996 | 11515089 ~ 11515665 (-) |
| G79642 | NA | non-coding | upstream | 898485 | 11533578 ~ 11535398 (-) |
| G79644 | NA | non-coding | upstream | 900700 | 11535793 ~ 11536344 (-) |
| LOC103027264 | NA | other | downstream | 297784 | 10294488 ~ 10336716 (-) |
| LOC103027354 | LOC103027354,LOC108438753 | other | downstream | 562616 | 10034686 ~ 10071884 (-) |
| LOC111193185 | stac,LOC107715935,LOC107670884 | other | downstream | 1979483 | 8650628 ~ 8655017 (-) |
| spdya | spdya | other | downstream | 1992668 | 8632646 ~ 8641832 (-) |
| LOC111193183 | NA | other | downstream | 2116852 | 8476397 ~ 8517648 (-) |
| G79582 | NA | other | upstream | 293547 | 10928640 ~ 10929596 (-) |
| ltbp1 | ltbp1 | other | upstream | 306594 | 10941687 ~ 11183941 (-) |
| G79865 | NA | other | upstream | 1334348 | 11969441 ~ 11971939 (-) |
| G79945 | NA | other | upstream | 1522493 | 12157586 ~ 12192028 (-) |
| ncmap | NA | other | upstream | 1699306 | 12334399 ~ 12372804 (-) |
