zbtb8a (zbtb8a)


Basic Information

Item Value
gene id zbtb8a
gene name zbtb8a
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 8520075 ~ 8527936 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007257568.3
cacacacacacacacactaacggGTTTCGGTCTTTCGGGCTAAGCAGGAAGTGATCAGTTAAAGCTGGAGGGGGTGGGAAACAGCACCACCACTAAAACCGACCAAAGTAGCCGAAAGACATGGAGATGGTCTGCGAAAGTGGGACGAGTAGACCGTACCGGACCCCGAGCGAGCCGGGTCAGCAGCTGATCCACAAATTCACGAGTGCAGACATATCAGCCAATCACCAGTGCTGCCTCCTGAAACAGCTGGACCAACAGAGACGGAAGCAGCTCTTCTGTGACTGCAACATCCTTGTGGAGGGGCACCTTTTCCGGGCACACCGTAACGTCCTGTTCGGCAGCAGCGGCTACTTCCGCATGCTGCTCTCCCAGGGGGCCAAGAGCAGCCTGGAGCCCGTCAGTGCCTCCTTTGACGCTTTCAGCCCCGACATCTTTACCATCATCCTGGACTTTGTGTACTCTGGAAAACTGGAGCTTAACAGCACCAATATGATCGAGGTGATGTCAGCGGCCAGCTACCTGCAGATGGATGACGTCATCGCCTACTGCAAGTCCTTCATCAAATCCTCCCTGGAGATCAGCACCAAGGAGGAGGACAGCCGCTACCTGTGTTTGTCGGATGGCAGCGCTTCACGAGACGGTGGTGAGGATGGCAGTGAAGAGCCCACGGCCTGCGAGGTCagcacagccaatgaaaacgtCCTTTGGGACCAGCAGGAGGAGGACGACCAGTCTAAATATGAGTACCCTGGAGAGGTGACCAGCCCACAGTCCTCAGCCTTGCCGCAGAGCCCCCCGACCCAATCCATCATGGACTCTGGAATGGAGGAGGATCAGGCGGTGCAGTTCACGGCGGTGGAGCCCCGGAGGAGGGGGAACAGGAAGAGAACGGCCACGCATCGCTACGCTCCAGACGATTCACCCTTGGACCTCCAGTCTTCTCACAAAGCAGATGAACTCTATGCCACCATGCCCACTATTTTAGGAGTGGTGGGTGttttcaacaaagaCAGCAACCCTTGCATGCGCTTCAAGTGCCCGTTCTGCACGCACACGGTGAAGAGGAAGGCTGATCTGAAGAGACACCTGCGCTGTCATACGGGCGAGAGGCCGTACCCATGCCAGGCATGCAGCAAGCGCTTCACCCGTCTCGAGCACCTCCGCAGCCATTTTGAAACGATCCATCAGGCACGGAAGCTGGTGTGTCGGAAGTGTAAGTGTCCGGTAACGGAGGAAAGCGGTCGCGTCGTGTGTGAGGGAACCCGCCGTTACCGGCTGTGCGGAACGTGCATTCACGAGAGTGGCCTCCTGACGGACGCCACTGACACTAATGGAGAGGAACCTGGGCTGATGCTTGGCGTTGAGGAGGACCTAGAGGAAAACAGGGACATGGGCTGGGCAATGGACGACGATGACCTGGCGGAAGACTCAGGAACTGACCTAATTATTCAGGAAGTGGAGGACAGCGATGAGGAGGCTGCAGCCaagtaaaatgtgtgtgtgtgtgagtgtgagcgaGAAGTTGGTGCCAGTTAAATTTAACTTTCTTTGGAAACTCTCTCAAgtttaaatcaaagaaaatacTAAGTTCTATAATGGTATAAATGTATACTTGTAatataaaattatgtaaatagATTATTTCACAAACACAGTTGCTTAAATTACAATTATGTAATTGTGTACTGTTGGTTATATGAGAAAGATGATCATGCAGTGTTCTATTTTGCAGAATACTTAATAATTTCTcagttattttctgtaattttaaacaatgtttGTACATGCTTATTTATCTACACTTGTACAATAATCCTGCTACTTCTAAAGATTCTCAAGGATTTGATGGAAAAGGGAAACCATGCGCTACAATATTTtgtgtttgattttatttaattttttttgcagaacagTTTGAACAatcaagtgtattttttttttgtttttattcgtTTCAGTTTTGTGAAAACAAATTTGCACTTATGTATCTTCTTTTTATCATTATTGTGTTGTATTAAGAGCGttattatgttaatttattatatttttacttttttaaagaaaatttatacatttattattgccTTGGATTAAAACTGTTACGATTTAAACTATA
>XM_007257569.3
gagaggcagGCAGCGGGGCCGGAGCGGACTTAGGTGGGTGGCGGGCGGAGGTCAGGCAGGAGGGAGTCAGCGGGCTAGGCGGAGCTCCGCGCACGGGGAGAGAGCACCGCGCCGCCGCTGCGCAGTGCAGGATCTCCCGCTGAAGAAGAGGGCTAACCGCGGGCTGTGGGAGCCGAGCTAAGTCCCTGAACCACCCCGGGCGTGGTTTGCATGCTGATCCACAAATTCACGAGTGCAGACATATCAGCCAATCACCAGTGCTGCCTCCTGAAACAGCTGGACCAACAGAGACGGAAGCAGCTCTTCTGTGACTGCAACATCCTTGTGGAGGGGCACCTTTTCCGGGCACACCGTAACGTCCTGTTCGGCAGCAGCGGCTACTTCCGCATGCTGCTCTCCCAGGGGGCCAAGAGCAGCCTGGAGCCCGTCAGTGCCTCCTTTGACGCTTTCAGCCCCGACATCTTTACCATCATCCTGGACTTTGTGTACTCTGGAAAACTGGAGCTTAACAGCACCAATATGATCGAGGTGATGTCAGCGGCCAGCTACCTGCAGATGGATGACGTCATCGCCTACTGCAAGTCCTTCATCAAATCCTCCCTGGAGATCAGCACCAAGGAGGAGGACAGCCGCTACCTGTGTTTGTCGGATGGCAGCGCTTCACGAGACGGTGGTGAGGATGGCAGTGAAGAGCCCACGGCCTGCGAGGTCagcacagccaatgaaaacgtCCTTTGGGACCAGCAGGAGGAGGACGACCAGTCTAAATATGAGTACCCTGGAGAGGTGACCAGCCCACAGTCCTCAGCCTTGCCGCAGAGCCCCCCGACCCAATCCATCATGGACTCTGGAATGGAGGAGGATCAGGCGGTGCAGTTCACGGCGGTGGAGCCCCGGAGGAGGGGGAACAGGAAGAGAACGGCCACGCATCGCTACGCTCCAGACGATTCACCCTTGGACCTCCAGTCTTCTCACAAAGCAGATGAACTCTATGCCACCATGCCCACTATTTTAGGAGTGGTGGGTGttttcaacaaagaCAGCAACCCTTGCATGCGCTTCAAGTGCCCGTTCTGCACGCACACGGTGAAGAGGAAGGCTGATCTGAAGAGACACCTGCGCTGTCATACGGGCGAGAGGCCGTACCCATGCCAGGCATGCAGCAAGCGCTTCACCCGTCTCGAGCACCTCCGCAGCCATTTTGAAACGATCCATCAGGCACGGAAGCTGGTGTGTCGGAAGTGTAAGTGTCCGGTAACGGAGGAAAGCGGTCGCGTCGTGTGTGAGGGAACCCGCCGTTACCGGCTGTGCGGAACGTGCATTCACGAGAGTGGCCTCCTGACGGACGCCACTGACACTAATGGAGAGGAACCTGGGCTGATGCTTGGCGTTGAGGAGGACCTAGAGGAAAACAGGGACATGGGCTGGGCAATGGACGACGATGACCTGGCGGAAGACTCAGGAACTGACCTAATTATTCAGGAAGTGGAGGACAGCGATGAGGAGGCTGCAGCCaagtaaaatgtgtgtgtgtgtgagtgtgagcgaGAAGTTGGTGCCAGTTAAATTTAACTTTCTTTGGAAACTCTCTCAAgtttaaatcaaagaaaatacTAAGTTCTATAATGGTATAAATGTATACTTGTAatataaaattatgtaaatagATTATTTCACAAACACAGTTGCTTAAATTACAATTATGTAATTGTGTACTGTTGGTTATATGAGAAAGATGATCATGCAGTGTTCTATTTTGCAGAATACTTAATAATTTCTcagttattttctgtaattttaaacaatgtttGTACATGCTTATTTATCTACACTTGTACAATAATCCTGCTACTTCTAAAGATTCTCAAGGATTTGATGGAAAAGGGAAACCATGCGCTACAATATTTtgtgtttgattttatttaattttttttgcagaacagTTTGAACAatcaagtgtattttttttttgtttttattcgtTTCAGTTTTGTGAAAACAAATTTGCACTTATGTATCTTCTTTTTATCATTATTGTGTTGTATTAAGAGCGttattatgttaatttattatatttttacttttttaaagaaaatttatacatttattattgccTTGGATTAAAACTGTTACGATTTAAACTATA

Function

symbol description
zbtb8a Predicted to enable RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in epidermal cell. Orthologous to human ZBTB8A (zinc finger and BTB domain containing 8A).

NR:

description
zinc finger and BTB domain-containing protein 8A

GO:

id name namespace
GO:0005488 binding molecular_function

KEGG:

id description
K10495 ZBTB8; zinc finger and BTB domain-containing protein 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007257568.3 False 2119 mRNA 0.48 4 8520075 8527936
XM_007257569.3 True 2146 mRNA 0.49 4 8520075 8527661

Neighbor

gene id symbol gene type direction distance location
dlgap2 dlgap2,LOC107583594,LOC107654879,LOC107715999,LOC107721130,LOC107583025 coding downstream 297757 8008547 ~ 8222318 (-)
cln8 cln8 coding downstream 523256 7986161 ~ 7996819 (-)
LOC111193126 NA coding downstream 552397 7931051 ~ 7967678 (-)
arhgef10 arhgef10,LOC107721185,LOC107716000 coding downstream 594116 7825663 ~ 7925959 (-)
kbtbd11 kbtbd11,LOC102794541 coding downstream 699873 7811870 ~ 7820202 (-)
gale gale,LOC107721820,LOC107583591 coding upstream 1901 8529837 ~ 8549967 (-)
LOC103047525 LOC108433331 coding upstream 47330 8575266 ~ 8580061 (-)
LOC103047224 LOC103047224,LOC108433332,LOC107583588 coding upstream 73146 8601082 ~ 8604516 (-)
wdr43 wdr43 coding upstream 80008 8607944 ~ 8622583 (-)
ush2a ush2a,LOC108444108,LOC108414482 coding upstream 240726 8768662 ~ 9026556 (-)
G78890 NA non-coding downstream 87791 8428518 ~ 8432284 (-)
LOC111193182 NA non-coding downstream 104965 8379489 ~ 8415110 (-)
G78940 NA non-coding downstream 225990 8292262 ~ 8294085 (-)
G78911 NA non-coding downstream 368799 8150455 ~ 8151276 (-)
G78891 NA non-coding downstream 479883 7981970 ~ 8040192 (-)
G78978 NA non-coding upstream 8000 8535936 ~ 8537624 (-)
G78983 NA non-coding upstream 34162 8562098 ~ 8563527 (-)
G78986 NA non-coding upstream 52647 8580583 ~ 8580826 (-)
G79039 NA non-coding upstream 831642 9359578 ~ 9359810 (-)
G79064 NA non-coding upstream 1068076 9596012 ~ 9596425 (-)
LOC111193183 NA other downstream 2427 8476397 ~ 8517648 (-)
LOC111193177 kcnh1,LOC108433307,LOC106904951,LOC103476431,LOC102309410,LOC103370850,LOC103137420,LOC101155792 other downstream 1299221 7198909 ~ 7220854 (-)
G78297 kdm1a other downstream 3333717 5184792 ~ 5186358 (-)
G78083 NA other downstream 4313691 4045434 ~ 4206384 (-)
G78023 scfd1 other downstream 4679505 3834562 ~ 3840570 (-)
spdya spdya other upstream 104710 8632646 ~ 8641832 (-)
LOC111193185 stac,LOC107715935,LOC107670884 other upstream 122692 8650628 ~ 8655017 (-)
LOC103027354 LOC103027354,LOC108438753 other upstream 1506750 10034686 ~ 10071884 (-)
LOC103027264 NA other upstream 1766552 10294488 ~ 10336716 (-)
G79582 NA other upstream 2400704 10928640 ~ 10929596 (-)

Expression


Co-expression Network