wdr25 (wdr25)


Basic Information

Item Value
gene id wdr25
gene name wdr25
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 4591368 ~ 4598900 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022672625.1
gACTGTGGATAGTTAAGGTCGCACTGCCAATCCATGCATTCATTATTTAGttgatatattataattattcgGTCAGAGAGGAGCCTAAAgagtttttttcagtgtttagaGGGGAAGTGGTGCATCATATAAGGTTTGACATAATTTTGGGACCACAGCAAGGATAAATGaatcacactttctctctctgtttgacTCTTTAAACTAGTGTTTTCATCCAATATCTGAAAACATCCATAGTTCCTCATTAAGCAGCCCTAACGACTAGGCTATGAGTTCAAAAAGACCCCAGCCCACCCCAGCAGGAGTGAGGCCATATGTCTCAAAGAGGCAGAAGCTGTCCACACAGTCAGCAGACCTGAATACAGAGGGTTCCTCCAGCTCCCAGCACACAAACCTGCATCTGCTTTCAACAGTGTCAGAGAGGATACGGCCCCACCTAGGCAGAAAAGGAAGGACAGAGCTGCCGAAGTATGTCCAGCATCAGCTTCAGGCCCACCAGGGTCCAGTCAACACAGTGCAGTGGTGTCCAGTGCCTCATCTCAGCCATCTGCTGCTCTCTGCTTCTATGGACAAAACTTTTAAGGTTTGGGATGGTGCAGCCAGTGGACGCTGCCTTCAAACCTACTCTGGTCACAGTGGAGCTGTTCGAGATGCATGCTGGCTCCCATGTGGACGCCGCATTTTATCTGGATCTTTTGACAACACAGCTGCTGTGACAGAAGTGGAGACGGGTCAGGTGGTTGCCAAAATGGAAAACCAGTTTAAGGTGACGTGCCTGGCCTTTCAGCCCTCAGATCCCagtgtctttctgtgtggagggTTCAGTGCTGAGGTCAAGGCATGGGATTCTCGATCCTGTCAGgtGATCAGAACATACACGTCCAGGATCCAGCAGACACTGGACATCTTATTTCTGGGTGAAGGGAGGGAATTCATGACCAGCACGGACATGGTCAGTCAGGACTCTGCAGATCGCACGCTTATTGCCTGGGACTTCACCACTACTGCCAAAGTCTCCAATCAGATATTCCATGAGAGATACACCTGCCCCAGTCTGGCGCTGCACCCACAGGAAGACTCCTTTGTTGCTCAGACCAATGGAAACTACATTGCACTCTTCTCAGCCCAGAGGCCTTACCGGATGAACAAGATGAAGAGATTTGAAGGACACAAGGTGGAAGGTTATGCAGCGCAGTGTGAGTTCTCTTCAGATGGAACGATTCTGTCCTCAGGAAGCTCTACAGGCTCTGCACACTTCTACGACTTTCAGAGTGGACGAAGCGTGCTCAGGCTTCATGCTCATGAGCAggcctgcatgtgtgtgtcttttCACCCTGTGTTATCCTCGGTGGTTGCCACATGTGACTGGGGAGGAGAGATTAAAATATGGAACTGAACTCAGAGACTTTCATACCTGCAGAGGACAATTCTGTatttatataaagaaataaaggacaCTTTACAGTCAACA
>XM_022672626.1
TGATTAAAGCAGAGGCAGAGCTtgtaggttagctagttagcttagctagagaTAAGCGGATAAACTGGCTCTGTTTAAATTAGAATAGTAGTATTTAACATCTCTGAGTTTATTCACAGATTCTGCGGTctgatcattattattattcttattattatgatatttgTTCTGAATGATTTCGCCATAAATCTATTCGAAAGCCTAGTGTTATGTCGATTTGTGTTAGGTTAACAGTGAGCTCTTCAGCACTCCTTAGCTATAGTTACAGATAGATAAAGCTGCACGAAAAAACAGAAGTTATGGGGAAAATAACTTTATACGAGAATGGGCCCAGCAGAAGTATAGGCAGGACATTTGGATGGCTTTAATTTCTAGGTTAAAAATGAGATGTGTCAGAGAGGATACGGCCCCACCTAGGCAGAAAAGGAAGGACAGAGCTGCCGAAGTATGTCCAGCATCAGCTTCAGGCCCACCAGGGTCCAGTCAACACAGTGCAGTGGTGTCCAGTGCCTCATCTCAGCCATCTGCTGCTCTCTGCTTCTATGGACAAAACTTTTAAGGTTTGGGATGGTGCAGCCAGTGGACGCTGCCTTCAAACCTACTCTGGTCACAGTGGAGCTGTTCGAGATGCATGCTGGCTCCCATGTGGACGCCGCATTTTATCTGGATCTTTTGACAACACAGCTGCTGTGACAGAAGTGGAGACGGGTCAGGTGGTTGCCAAAATGGAAAACCAGTTTAAGGTGACGTGCCTGGCCTTTCAGCCCTCAGATCCCagtgtctttctgtgtggagggTTCAGTGCTGAGGTCAAGGCATGGGATTCTCGATCCTGTCAGgtGATCAGAACATACACGTCCAGGATCCAGCAGACACTGGACATCTTATTTCTGGGTGAAGGGAGGGAATTCATGACCAGCACGGACATGGTCAGTCAGGACTCTGCAGATCGCACGCTTATTGCCTGGGACTTCACCACTACTGCCAAAGTCTCCAATCAGATATTCCATGAGAGATACACCTGCCCCAGTCTGGCGCTGCACCCACAGGAAGACTCCTTTGTTGCTCAGACCAATGGAAACTACATTGCACTCTTCTCAGCCCAGAGGCCTTACCGGATGAACAAGATGAAGAGATTTGAAGGACACAAGGTGGAAGGTTATGCAGCGCAGTGTGAGTTCTCTTCAGATGGAACGATTCTGTCCTCAGGAAGCTCTACAGGCTCTGCACACTTCTACGACTTTCAGAGTGGACGAAGCGTGCTCAGGCTTCATGCTCATGAGCAggcctgcatgtgtgtgtcttttCACCCTGTGTTATCCTCGGTGGTTGCCACATGTGACTGGGGAGGAGAGATTAAAATATGGAACTGAACTCAGAGACTTTCATACCTGCAGAGGACAATTCTGTatttatataaagaaataaaggacaCTTTACAGTCAACA

Function

symbol description
wdr25 Orthologous to human WDR25 (WD repeat domain 25).

NR:

description
WD repeat-containing protein 25-like isoform X1

GO: NA

KEGG:

id description
K24742 WDR25; WD repeat-containing protein 25

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022672625.1 True 1474 mRNA 0.48 6 4591368 4597656
XM_022672626.1 False 1448 mRNA 0.46 7 4591368 4598900

Neighbor

gene id symbol gene type direction distance location
dlk1 NA coding downstream 48491 4534928 ~ 4542877 (-)
LOC103042641 dio3 coding downstream 77259 4511974 ~ 4514109 (-)
dync1h1 dync1h1 coding downstream 136798 4388405 ~ 4454570 (-)
wdr20 wdr20 coding downstream 211728 4368394 ~ 4379640 (-)
nemf nemf coding downstream 238120 4330782 ~ 4353248 (-)
slc25a47 NA coding upstream 14812 4613712 ~ 4616794 (-)
fancm NA coding upstream 25201 4624101 ~ 4665487 (-)
togaram1 NA coding upstream 67671 4666571 ~ 4678410 (-)
luzp1 luzp1 coding upstream 611829 5210729 ~ 5262996 (-)
LOC103024242 LOC108430197 coding upstream 2090404 6689304 ~ 6707961 (-)
G78241 NA non-coding downstream 73058 4438587 ~ 4518310 (-)
G78143 NA non-coding downstream 260753 4329092 ~ 4330615 (-)
G78140 klhdc2 non-coding downstream 263720 4326980 ~ 4327648 (-)
G78131 NA non-coding downstream 281731 4307517 ~ 4309637 (-)
G78087 NA non-coding downstream 476263 4114772 ~ 4115105 (-)
G78265 wars,LOC107088074 non-coding upstream 9008 4607908 ~ 4609149 (-)
G78266 NA non-coding upstream 11106 4610006 ~ 4647983 (-)
G78279 NA non-coding upstream 578175 5177075 ~ 5178793 (-)
G78296 NA non-coding upstream 590108 5189008 ~ 5204565 (-)
G78302 NA non-coding upstream 605747 5204647 ~ 5204974 (-)
G78083 NA other downstream 384984 4045434 ~ 4206384 (-)
G78023 scfd1 other downstream 750798 3834562 ~ 3840570 (-)
prkd1 prkd1,LOC107590910,LOC107719483,LOC107733145 other downstream 877011 3645097 ~ 3714357 (-)
G77892 NA other downstream 1242379 3297582 ~ 3348989 (-)
bmf bmf other downstream 1384682 3175798 ~ 3206686 (-)
G78297 kdm1a other upstream 585892 5184792 ~ 5186358 (-)
LOC111193177 kcnh1,LOC108433307,LOC106904951,LOC103476431,LOC102309410,LOC103370850,LOC103137420,LOC101155792 other upstream 2600009 7198909 ~ 7220854 (-)
LOC111193183 NA other upstream 3877497 8476397 ~ 8517648 (-)
spdya spdya other upstream 4033746 8632646 ~ 8641832 (-)
LOC111193185 stac,LOC107715935,LOC107670884 other upstream 4051728 8650628 ~ 8655017 (-)

Expression


Co-expression Network