XLOC_007302 (AL645792.1)


Basic Information

Item Value
gene id XLOC_007302
gene name AL645792.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 25043810 ~ 25046769 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00014410
ttacagATTGGAATGGACCACAAGTAGAAAAaagggaatcacacacctcaTCAAAGAATGGAAACTGATGGTCAGGAATGGACGGGTGCATCGCTGGACGTGTTTGCTAATGGAGAGCAGGCAGAAGAGAGAGACTCACAGGCGAATTGGTGGACATTCCCcccaaaaaatgctgaaaaacagcaGGAAGGGTTTTGTTGGGGTTGTCTTGTTTTTTTGCAGGTTGAATTGgagcagaagaaggagactcGCAAGAAGAACGGTGGAGACATACTTGAAGACCTGGAGCTAATGAAGCAGACTGGGACAGAGCATGTGGAGGAACAGGGAAACACACTTCAGTAATGACAAGTACATCATAATAAATTAGagtgGAGTGGAGAAACGAAGGAATCACACATCTCAGCCATGATAAGACTCTGATAATCAGGTATCACCTATTAACAACAGATgttcaagaggaagggggtggtggtgg
>TCONS_00016207
CCAAAATGAAGTAATGGTGGTTGGATTAGATGGTATttaggccttgtctgtgtcagttttttttttcaggtgatggagagagagcaggcagaagagggagactTACAAGAGCATCTGTGGACATTTATCTGAAAAATGCTGGGGAACAGCAGGTAGAGCTCTGTCAGTGCTGTCTATAGGTGCAGCCCATAGGTTTGAATACTTCATTTTAGATAGATgataaaagcaaaattctccttcAAAAGATATTATGCTGCTTCCTCTTGGTGAATGCGATTATACTTATTTCAGGTATTTCTTGATAGTTTAGTCATTTGTTTCATTAATTTGGCAACTGTTAGTGTTTTATTTAGGACCACActagatttatttacaatgcttttgagtgtgtaagtgcatagtgtatacaTTTATAGGGTATAGTGTCCCATTTGGGAGGCAGcttttgtcttttgcagattggagtggagcagaaAAAGGAGACTCACAAGGGGAGCGGTGGAGATATATACTTGGAGACCTGTAGCTGAGGAAGCAGACTGGGACAGAGCATGTGGAGGAACAGGGAAACACACTTCAGTAATGACAAGTACATCATAATAAATTAGGTATtgtcttaattttttaagttgaatcaaattaacttcataaaacatttaaaaattatatatgaaCGTTTTTTACAGATTGACTGTCGGGTATTGTCTTTAAATAGAtgttgtctttgtcttttacagagtgGAGTGGAGAAACGAAGGAATCACACATCTCAGCCATGATAAGACTCTGATAATCAGGTATCACCTATTAACAACAGATgttcaagaggaagggggtggtggtgggcattaGCCGGGCTCAGAGTACAGGAGTTtacaataataaatttatttacattgtaggtAATGGAACCACAATAGGCAGAAGAGGGAAACCCACTAGCTGAATGCTGAATATTTATCTGATGAACACTGGAGAACACGGTTTATTGCTGGTAATCAGCCGTCAAGTAGAGTTCTGtaagtcttgtttttgtcttttgcagattagaCTGGGGCATGTGGAGAAATGGAAATCACACTTCAGCAATGCCTAAAAACAGATGGTCTGGTCAGGAATTTCCTAACCTAATgcaatggatgggtggatgaatgaatgaaaaatagatgtcCTACCAAGAGGGAGGGTAGGTGGTGGGCTTAGACAGTTAGCTAGACAACTTGTCTGTGGCAAGTGTttcctggatggatggatgga

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000103274

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00014410 False 478 lncRNA 0.45 4 25043810 25046357
TCONS_00016207 True 1257 lncRNA 0.39 2 25045421 25046769

Neighbor

gene id symbol gene type direction distance location
XLOC_007301 ppargc1b coding upstream 42226 24934736 ~ 25001584 (+)
XLOC_007300 NA coding upstream 165229 24877102 ~ 24878581 (+)
XLOC_007299 arhgef37 coding upstream 170156 24840669 ~ 24873654 (+)
XLOC_007298 BX005228.1 coding upstream 686293 24357400 ~ 24357517 (+)
XLOC_007297 klhl3 coding upstream 738724 24283915 ~ 24305086 (+)
XLOC_007303 NA coding downstream 5940 25052709 ~ 25055796 (+)
XLOC_007304 NA coding downstream 9688 25056457 ~ 25058284 (+)
XLOC_007305 NA coding downstream 49119 25095888 ~ 25106060 (+)
XLOC_007306 NA coding downstream 81059 25127828 ~ 25169533 (+)
XLOC_007307 si:dkey-280e21.3 coding downstream 417912 25464681 ~ 25502537 (+)
XLOC_007293 NA non-coding upstream 809107 24230911 ~ 24234703 (+)
XLOC_007279 NA non-coding upstream 2084590 22841157 ~ 22959220 (+)
XLOC_007278 BX005043.2 non-coding upstream 2231813 22807498 ~ 22811997 (+)
XLOC_007309 NA non-coding downstream 475328 25522097 ~ 25535767 (+)

Expression


Co-expression Network