LOC111190666


Basic Information

Item Value
gene id LOC111190666
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172687.1
NCBI id APWO02002285.1
chromosome length 56661
location 22121 ~ 23352 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>LOC111190666
AGGAGCCTGAGAGTCAGCTTCCTATAAACCTTCCAACATGACCCctatactgctgctgctgctgctgacaactGCATCCTGTGTGTCTGGTAAAGTTGAGTTCAGTCAGTCAGCGGCTGTAATACTCCAGCATGGACAGACTCTGAGCATCAGCTGTAAGGTCTCTGGATATTCATTTACTGACAGCTATTGCACCACCTTCATCCGCCAGTCTTCAGGAAACACATTGGAGTGGATTGGAGAAACATGTGGAGATGCAGCGACACGTTATAGTGATATTTTAAAGAGCAAGTTCAGCATCTTCAAAGATTCCTCCAGCAGCACGGTGACTTTAATACGGCAGAGTGTTCAGACTGAAGACACAGCTGTGTATTACTGCACTCGGAGAGGATATGGAACAACACAGTGCTACAGGTGGAGGAAGTGCTTTAACAAAAACACCACCTTCTCTCTACTGAGCAAAAGCAAAAAGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC111190666 True 475 V_segment 0.46 3 22121 23352

Neighbor

gene id symbol gene type direction distance location
LOC111190670 NA non-coding upstream 11785 35137 ~ 35596 (-)
LOC111190671 NA non-coding upstream 21501 44853 ~ 45336 (-)
LOC111190669 NA non-coding upstream 32280 55632 ~ 56292 (-)
G287430 NA other upstream 7364 30716 ~ 31202 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G1186224 NA non-coding NC_048577.1 CM023231.2 51631694 ~ 51649513 (-)