LOC111190670


Basic Information

Item Value
gene id LOC111190670
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172687.1
NCBI id APWO02002285.1
chromosome length 56661
location 35137 ~ 35596 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>LOC111190670
TCATCAGTTCTCATCATGAAGATCACACTCTCCTTGTTACTGCTACTGCTCACCTTCAGCAGTGTGAAATGTCAGAGTATGGAATCATTAGAAACTGCAGTTCAGATAAAACCTGGAGAAACTCTGAGTCTCTCCTGTAGAGGATCTGGATTTGATTTTAGTCAGTATGGAATGCACTGGATCAGACAGCAGGCTGGAAAACCACTGGAGTGGATGGGGGTTATTTGGTATGATGCCAGCAAAACTATATATGCCCAAGCAGTTGAGGGACGTTTGGAAATTACGAGAGAAAACTCCAAGAACATGGTGTATCTGAAGCTGACTGGTTTGACTGATCAGGATTCAGCTGTGTATTACTGTGCTCGGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC111190670 True 369 V_segment 0.43 2 35137 35596

Neighbor

gene id symbol gene type direction distance location
LOC111190666 NA coding downstream 11785 22121 ~ 23352 (-)
LOC111190671 NA non-coding upstream 9257 44853 ~ 45336 (-)
LOC111190669 NA non-coding upstream 20036 55632 ~ 56292 (-)
G287430 NA other downstream 3935 30716 ~ 31202 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
striped catfish (Pangasianodon hypophthalmus) LOC117598907 NA misc NC_047607.1 CM018553.1 22231972 ~ 22232468 (-)