XLOC_007336


Basic Information

Item Value
gene id XLOC_007336
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 28444739 ~ 28444980 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00015983
gccacaactttctctgtgtttcagcaaattgactatttttggtgacaaatcttaagTTGACACACATTTTGGAAAAATCCAAAATTGAAATTTTACAAAAGCTCAGCAATACACTCAAAATGCACTACTCTTTCGTTATGTTCATGGCTGTTTTGTCCCCATTGACAAAGTCAAAATTAAACAGTTtgccaacagggaaaaccaccagcAGTCAAGAATGCATTATTtgatgtcatggcttt

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00015983 True 242 lncRNA 0.36 1 28444739 28444980

Neighbor

gene id symbol gene type direction distance location
XLOC_007334 pin4 coding upstream 7313 28432737 ~ 28437426 (+)
XLOC_007333 mid2 coding upstream 59174 28281744 ~ 28385565 (+)
XLOC_007332 NA coding upstream 362667 28081081 ~ 28082072 (+)
XLOC_007331 NA coding upstream 610978 27720386 ~ 27833761 (+)
XLOC_007330 NA coding upstream 862963 27577951 ~ 27581776 (+)
XLOC_007337 psmd10 coding downstream 19756 28464736 ~ 28469244 (+)
XLOC_007338 xiap coding downstream 28193 28473173 ~ 28483419 (+)
XLOC_007339 stag2b coding downstream 41233 28486213 ~ 28527422 (+)
XLOC_007340 hmmr coding downstream 100218 28545198 ~ 28562971 (+)
XLOC_007341 NA coding downstream 122584 28567564 ~ 28660969 (+)
XLOC_007329 NA non-coding upstream 729315 27564398 ~ 27715424 (+)
XLOC_007328 NA non-coding upstream 907379 27530421 ~ 27537360 (+)
XLOC_007342 NA non-coding downstream 412969 28857949 ~ 28910287 (+)
XLOC_007347 NA non-coding downstream 1634134 30079114 ~ 30243127 (+)
XLOC_007353 NA non-coding downstream 2009120 30454100 ~ 30455836 (+)
XLOC_007357 NA non-coding downstream 2180366 30625346 ~ 30627451 (+)

Expression


Co-expression Network