G34930


Basic Information

Item Value
gene id G34930
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 6718790 ~ 6719186 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU47020
cctgaatatctatctagctaattctaaagttaagctaactgagtcacaagctgtattttattaaacacacagtgggtttaatttatgttttgattcagagaagagtctttttaaccagctatcaaaacatctcatcacagtttacatggttaattacctttcttttagaaaaatctccgtatatccagattagttttaacgacagctgctccgactagctgcctgaactcacagcgaggggaagggcggggcttcccgcacactaaactgcgctccgcaaaaccagctagctgattggctgtttctcctgaaaggcgggactttctccttgaaccggcaccacgattggttaagagacacacagcggtcagtgcattgtcgcctgtggcctatatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47020 True 397 lncRNA 0.43 1 6718790 6719186

Neighbor

gene id symbol gene type direction distance location
LOC103031150 LOC108426536 coding upstream 13792 6698639 ~ 6704998 (+)
LOC103030206 timm23a,timm23,LOC103030206,LOC108426535,LOC107690962,LOC107561858,LOC107684090 coding upstream 38769 6675542 ~ 6680021 (+)
prph2 prph2,prph2a,LOC107601435,LOC107581607,LOC107684088 coding upstream 130170 6583214 ~ 6588620 (+)
tbcc NA coding upstream 137531 6579898 ~ 6581259 (+)
LOC103028092 LOC108273792 coding upstream 151684 6560860 ~ 6567106 (+)
LOC103046215 si:ch73-127m5.1,LOC108410513,LOC108273477,LOC107690930,LOC107755465,LOC107749846,LOC107684096,LOC105892755 coding downstream 14125 6733311 ~ 6776528 (+)
LOC103031986 ndst2b,LOC108410510,LOC108273828,LOC107755463,LOC107684097,LOC107749844 coding downstream 59016 6778202 ~ 6877033 (+)
LOC103033683 LOC108410508 coding downstream 302661 7021847 ~ 7028159 (+)
kctd2 kctd2,LOC108410512,LOC107666921,LOC107727321,LOC107582756 coding downstream 309945 7029131 ~ 7040685 (+)
slc16a5 NA coding downstream 324296 7043482 ~ 7056429 (+)
G34923 NA non-coding upstream 28651 6689792 ~ 6690139 (+)
G34916 NA non-coding upstream 48799 6669762 ~ 6669991 (+)
G34903 NA non-coding upstream 54807 6663657 ~ 6663983 (+)
LOC107197904 NA non-coding upstream 230362 6483624 ~ 6488428 (+)
LOC111192360 NA non-coding upstream 346040 6371928 ~ 6372750 (+)
G35012 NA non-coding downstream 90042 6809228 ~ 6942271 (+)
G35016 LOC108410509 non-coding downstream 161297 6880483 ~ 6891804 (+)
G35017 NA non-coding downstream 173319 6892505 ~ 6897393 (+)
G35031 NA non-coding downstream 268646 6987832 ~ 7050629 (+)
G35034 sec24c non-coding downstream 286590 7005776 ~ 7009917 (+)
LOC103029551 qki2,LOC103029551,LOC108426533,LOC107684089,LOC108274051,LOC107749853,LOC107755469 other upstream 55183 6592607 ~ 6663607 (+)
slc38a10 slc38a10,LOC102792191,LOC107749860 other upstream 177330 6502145 ~ 6541460 (+)
LOC103045604 LOC108426437,LOC107683136 other upstream 460740 6246646 ~ 6258050 (+)
dnmbp dnmbp,LOC107722208,LOC107684043 other upstream 962674 5692522 ~ 5756116 (+)
LOC103025551 sema4g other upstream 1794024 4882556 ~ 4924766 (+)
G34931 NA other downstream 11768 6730954 ~ 6731424 (+)
G35021 NA other downstream 183231 6902417 ~ 6903997 (+)
fasn fasn other downstream 1666987 8386173 ~ 8438865 (+)
LOC103037241 wac,waca,LOC107738973,LOC107665881,LOC107749376 other downstream 1722946 8442132 ~ 8472989 (+)
LOC103024481 adamts14,LOC103367006 other downstream 2000168 8719354 ~ 8851392 (+)

Expression


Co-expression Network