G39215


Basic Information

Item Value
gene id G39215
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 25596568 ~ 25597951 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU52842
ggctgatagtgggtgcaggtgaattatgggagttggagtgaaggctgatagtgggtgcaggtgaattatgggagttgtagtgaggtctgatagtgggtgcaggtgaattatgggagttggagtgagggctgatagtgggtgcaggtaaattatgggagttggagtgagggctgatagtgggtgcaggtaaattatgggagttggagtgaggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU52842 True 212 lncRNA 0.50 2 25596568 25597951

Neighbor

gene id symbol gene type direction distance location
brca1 NA coding upstream 62090 25478536 ~ 25534478 (+)
LOC103024180 tlk2,LOC108431425 coding upstream 135432 25436455 ~ 25461136 (+)
LOC111192426 NA coding upstream 163351 25421325 ~ 25433217 (+)
LOC103022410 NA coding upstream 231685 25359459 ~ 25364883 (+)
LOC103022724 NA coding upstream 262639 25294253 ~ 25333929 (+)
G39205 NA non-coding upstream 50080 25546114 ~ 25546488 (+)
G39204 NA non-coding upstream 51039 25541785 ~ 25545529 (+)
G39191 NA non-coding upstream 131199 25462766 ~ 25465369 (+)
G39185 NA non-coding upstream 182574 25413651 ~ 25413994 (+)
G39177 NA non-coding upstream 227253 25368779 ~ 25369315 (+)
G39179 NA other upstream 221224 25374959 ~ 25375344 (+)
G38870 NA other upstream 979116 24616784 ~ 24617452 (+)
G38817 NA other upstream 1622048 23974161 ~ 23974520 (+)
trnar-ccu_27 NA other upstream 1846375 23750121 ~ 23750193 (+)
trnar-ccu_26 NA other upstream 1846477 23750019 ~ 23750091 (+)

Expression


Co-expression Network