Gene
RNA
| Item | Value |
|---|---|
| gene id | G59097 |
| gene name | NA |
| gene type | unknown |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 12288217 ~ 12289518 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU67286 | False | 570 | TUCP | 0.53 | 3 | 12288217 | 12289518 |
| TU67287 | True | 646 | TUCP | 0.50 | 2 | 12288217 | 12288977 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_12176488_12184112 | OBSL1 | coding | downstream | 102557 | 12176154 ~ 12185660 (-) |
| CI01000009_12167744_12175422 | NA | coding | downstream | 112795 | 12167744 ~ 12175422 (-) |
| CI01000009_12152712_12167719 | OBSL1B | coding | downstream | 120498 | 12152465 ~ 12167719 (-) |
| CI01000009_12007202_12021667 | MFSD6 | coding | downstream | 266180 | 12006768 ~ 12022037 (-) |
| CI01000009_11947288_11963040 | NAB1, NAB1B | coding | downstream | 325177 | 11946457 ~ 11963040 (-) |
| CI01000009_12304891_12322499 | NA | coding | upstream | 15171 | 12304689 ~ 12322924 (-) |
| CI01000009_12486758_12498650 | CALCRLA, CALCRL | coding | upstream | 196108 | 12485626 ~ 12498650 (-) |
| CI01000009_12531562_12540003 | NA | coding | upstream | 241607 | 12531125 ~ 12540373 (-) |
| CI01000009_12643324_12643737 | NA | coding | upstream | 353743 | 12643261 ~ 12643988 (-) |
| CI01000009_12659018_12693857 | COL5A2 | coding | upstream | 368845 | 12658363 ~ 12694684 (-) |
| G59100 | NA | non-coding | downstream | 10304 | 12276360 ~ 12277913 (-) |
| G59096 | NA | non-coding | downstream | 25052 | 12249307 ~ 12263165 (-) |
| G59099 | NA | non-coding | downstream | 45879 | 12201926 ~ 12242338 (-) |
| G59094 | NA | non-coding | downstream | 87825 | 12200030 ~ 12200392 (-) |
| G59090 | NA | non-coding | downstream | 90777 | 12197149 ~ 12197440 (-) |
| G59151 | NA | non-coding | upstream | 76468 | 12365986 ~ 12369074 (-) |
| G59184 | NA | non-coding | upstream | 84357 | 12373875 ~ 12374203 (-) |
| G59185 | NA | non-coding | upstream | 84808 | 12374326 ~ 12374805 (-) |
| G59186 | NA | non-coding | upstream | 85348 | 12374866 ~ 12375298 (-) |
| G59200 | NA | non-coding | upstream | 103729 | 12393247 ~ 12393532 (-) |
| CI01000009_08858198_08860555 | NA | other | downstream | 3427654 | 8856310 ~ 8860563 (-) |
| G55814 | NA | other | downstream | 3860205 | 8425821 ~ 8428012 (-) |
| G53515 | NA | other | downstream | 6782969 | 5502395 ~ 5505248 (-) |
| G52828 | NA | other | downstream | 8056748 | 4217420 ~ 4231469 (-) |
| CI01000009_03261739_03262843 | NA | other | downstream | 9026260 | 3261038 ~ 3262843 (-) |
| CI01000009_13975122_13976026 | NA | other | upstream | 1685870 | 13975099 ~ 13978614 (-) |
| G59490 | NA | other | upstream | 1744046 | 14033564 ~ 14037873 (-) |
| G59811 | NA | other | upstream | 2572879 | 14862397 ~ 14887464 (-) |
| G59941 | NA | other | upstream | 2842586 | 15132104 ~ 15132503 (-) |
| CI01000009_15318811_15390382 | TNS1 | other | upstream | 3086742 | 15318811 ~ 15390382 (-) |
