G30410


Basic Information

Item Value
gene id G30410
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 63447890 ~ 63448572 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU40806
tattatactcttatactcCTAATTAggcaactgattcctgacaaattaaacctacacacttccctctgaactcagttaaaaaatagtaattttcccAACATGCCTGAAATTTTCTGCATTAGCTgtccatttttcatttctttggaattgttagactctttggcccattttctgcactacaactgcgcattcttgccgcttttagaccctttggtccgttttctgcgctacaactgcattCTCGACGCTTTTAGACTGTTTAGTCATTTTCCGCGCTACAACTTcgcattctcgccgcttttagactctttggtccgttttctgcgctacaactgcgcattctcgacgcttttagactctctgatccgttttcCACCCTAAACTTAGtattctcgccgcttttagactctttgccctttTTTCCTgccacaactgcgcactcttgccgcttttagactctttggcccgttttctgcgccacaactgCACATTCTCGCCGCATATAGActctttgttctgtttttcacgctacaactgagcactctcgctgcttttagacacccctgctttaaatgATGACAGACCAGAAAGCATGCATCTATCCTGAGTCCACTGCTGGGGATTTATTCAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU40806 True 632 lncRNA 0.44 2 63447890 63448572

Neighbor

gene id symbol gene type direction distance location
sgcb sgcb,LOC107597442,LOC107665396,LOC107718388,LOC107601954,LOC107683993,LOC107755229 coding downstream 83479 63357911 ~ 63364411 (-)
lrrc66 NA coding downstream 91601 63335850 ~ 63356289 (-)
LOC103038514 LOC108414611 coding downstream 328394 63114090 ~ 63119496 (-)
trappc8 trappc8 coding downstream 382658 63014238 ~ 63065232 (-)
LOC103046711 LOC108414824 coding downstream 439909 62979312 ~ 63007981 (-)
lnx1 lnx1,LOC107683953,LOC107665364 coding upstream 375300 63823872 ~ 63907665 (-)
kdr kdr coding upstream 887141 64335713 ~ 64370564 (-)
clock clock,clocka coding upstream 978532 64427104 ~ 64500676 (-)
nmu nmu coding upstream 1058387 64506959 ~ 64526668 (-)
cep135 cep135 coding upstream 1157799 64606371 ~ 64626394 (-)
G30354 ociad2 non-coding downstream 134835 63307994 ~ 63313055 (-)
G30348 NA non-coding downstream 152167 63292019 ~ 63295723 (-)
G30341 NA non-coding downstream 290236 63154931 ~ 63157654 (-)
G30286 NA non-coding downstream 313156 63125514 ~ 63134734 (-)
G30296 NA non-coding downstream 360934 63084327 ~ 63086956 (-)
G30408 NA non-coding upstream 17748 63466320 ~ 63468751 (-)
G30412 NA non-coding upstream 60655 63509227 ~ 63509431 (-)
G30409 NA non-coding upstream 78939 63527511 ~ 63550219 (-)
G30421 NA non-coding upstream 165194 63613766 ~ 63614344 (-)
G30454 NA non-coding upstream 316253 63764825 ~ 63774134 (-)
G30376 NA other downstream 113044 63330044 ~ 63334846 (-)
fryl fryl,LOC107683942,LOC107665346 other downstream 159782 63136951 ~ 63288108 (-)
LOC103043586 mark3b,LOC108412004,LOC107697167,LOC108258043 other downstream 1557161 61831841 ~ 61890729 (-)
LOC103029720 jag2,jag2b,LOC107718403,LOC107755239 other downstream 2083012 61292876 ~ 61364878 (-)
LOC111191938 NA other downstream 3078276 60369046 ~ 60369614 (-)
scfd2 scfd2 other upstream 79709 63528281 ~ 63763673 (-)
LOC103036530 cyp2p7,cyp2j20,LOC108415355 other upstream 1326112 64774684 ~ 64799176 (-)
trnad-guc_7 NA other upstream 1644506 65093078 ~ 65093149 (-)
trnad-guc_8 NA other upstream 1649030 65097602 ~ 65097673 (-)
LOC103031958 myo6 other upstream 3413893 66862465 ~ 67044318 (-)

Expression


Co-expression Network