G58175


Basic Information

Item Value
gene id G58175
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 13353380 ~ 13353599 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU66240
CTCATTCACGTCGCTGTCCGTTCAAATTACACCAGCCACAAGGGGCCGCCACACAATGTGCCTTGTTTTGGATTTTCCTGATGGATTCTTCAAAAAGGCTGTTCACGGAAACACCTTGTATGAATAGACCAGCGGCAGCCATTAAGCATAGAGGATGTCCAATCAGTCTCTAAAGTGTTGAGCTATGAAAGCAGAAACTGTTATGGAACAAAACCAGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66240 True 220 lncRNA 0.45 1 13353380 13353599

Neighbor

gene id symbol gene type direction distance location
CI01000009_13194613_13197758 NA coding upstream 153679 13194437 ~ 13199701 (+)
CI01000009_12854692_12859028 NA coding upstream 492349 12854193 ~ 12861031 (+)
CI01000009_12646484_12653748 GULP1, GULP1A coding upstream 699523 12646484 ~ 12653857 (+)
CI01000009_12504532_12504815 NA coding upstream 848486 12504380 ~ 12504894 (+)
CI01000009_12432736_12435509 NA coding upstream 917489 12432538 ~ 12436017 (+)
CI01000009_13394582_13476351 UBE2E3 coding downstream 38707 13392306 ~ 13476807 (+)
CI01000009_13549003_13580198 ITGA4 coding downstream 195404 13549003 ~ 13580233 (+)
CI01000009_13696525_13718933 SSFA2 coding downstream 342926 13696525 ~ 13718933 (+)
CI01000009_13752424_13753460 NA coding downstream 398825 13752424 ~ 13753823 (+)
CI01000009_13798741_13799037 NA coding downstream 443285 13796884 ~ 13799191 (+)
G58173 NA non-coding upstream 779 13352377 ~ 13352601 (+)
G58171 NA non-coding upstream 1331 13351822 ~ 13352049 (+)
G58162 NA non-coding upstream 5113 13347828 ~ 13348267 (+)
G58161 NA non-coding upstream 5711 13347426 ~ 13347669 (+)
G58160 NA non-coding upstream 6227 13346915 ~ 13347153 (+)
G58176 NA non-coding downstream 89 13353688 ~ 13353910 (+)
G58179 NA non-coding downstream 4319 13357918 ~ 13358120 (+)
G58168 NA non-coding downstream 29005 13382604 ~ 13383104 (+)
G58205 NA non-coding downstream 32387 13385986 ~ 13386197 (+)
G58252 NA non-coding downstream 170014 13523613 ~ 13585256 (+)
G58028 NA other upstream 209772 13140378 ~ 13143608 (+)
G57701 NA other upstream 330242 13006643 ~ 13023138 (+)
G57691 NA other upstream 434915 12906444 ~ 12918465 (+)
G57682 NA other upstream 461041 12825469 ~ 12892339 (+)
G58382 NA other downstream 679960 14039757 ~ 14039901 (+)
G58455 NA other downstream 893096 14246695 ~ 14258526 (+)
G58558 NA other downstream 1143337 14496936 ~ 14501514 (+)
G58649 NA other downstream 1296125 14649724 ~ 14652022 (+)
G58711 NA other downstream 1413060 14766659 ~ 14773773 (+)

Expression


Co-expression Network